Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq45 125 5e-24
seq1 91.5 1e-13
>seq45
Length=579175
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || |||| ||| | ||||||||| ||||||||||||||||||| || ||| | |
Sbjct 354894 TCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCC 354953
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
|| |||||||| || || ||| |||| | ||| || ||||| || | || |||||
Sbjct 354954 GTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTT 355013
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
||| ||| | |||||||| | ||| || ||| | |||| ||| | ||| ||
Sbjct 355014 ATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACTTCCAAGGTAAT 355073
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
| | || || ||||| || || || ||||||||||||||
Sbjct 355074 GGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 355112
>seq1
Length=1746572
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||| || || ||||||||||| | || |||| | | ||| ||||| || || ||
Sbjct 813862 GTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTTCTGCCATCCTCCAACTGCTTACCA 813921
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| |||| | ||| || ||||| || | || ||||| || || | ||||||
Sbjct 813922 GCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTCTGCTTG 813981
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| | ||| || | ||| ||| | || |||||||| ||
Sbjct 813982 ACATTGTCAATAGTGTCAGAAGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTC 814041
Query 18309 TTTACAAAAATTTGCATTTT 18328
|| || ||||||||||| ||
Sbjct 814042 TTAACGAAAATTTGCATATT 814061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343648632620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |