Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 1e-12 >seq16 Length=109755 Score = 89.7 bits (98), Expect = 1e-12 Identities = 271/411 (66%), Gaps = 16/411 (4%) Strand=Plus/Plus Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGA 35389 || |||||| | | |||||| |||||||||| ||||| ||| | | |||| Sbjct 14680 CATATCTGGGAAGGTAATGGATCGCGGGAATACTTGGATTCCCTAGGACTCAAGAGTAGA 14739 Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT 35449 ||||| |||||||| || | ||||||||||||||| | ||||| |||||| | ||| Sbjct 14740 CGAGAGGATGATTTGGGTCCTATCTACGGATTCCAATGGAGACATTTCGGTGCTAAGTAT 14799 Query 35450 GATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAG 35509 | ||| | |||| ||||| ||| | || |||||||| | || | || | | Sbjct 14800 GTCGATTGTGATACCGACTATACCGGACAAGGATTTGATCAAATCGCTACCATTATTCAT 14859 Query 35510 ACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568 || || | ||| ||||| | |||||||| || || | | || ||||||||| | Sbjct 14860 ACTCT-AAAGACCAATCCTTACGATAGAAGAATCATACTATCAGCTTGGAATCCTCCCGC 14918 Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACAT-GACTGCTCAATTTTATGT-GGCT--- 35623 | | | ||||| || ||||| || ||| | |||| || || || || ||| Sbjct 14919 TTTCAAAGAAATGGCACTACCTCCGTGTCACGTCTTCTGC-CAGTTCTACGTCAGCTTTA 14977 Query 35624 AAT-GGAGAA-------TTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGG 35675 ||| ||| || ||| |||||| |||| ||| || | ||| | || | | Sbjct 14978 AATCGGACAAGCCGAGGTTGAATTGCCAGATGTACCAGAGATCGTGCGATATGGGTCTTG 15037 Query 35676 GCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCA 35726 | || ||||| || ||||| || ||| |||| || || | |||| |||| Sbjct 15038 GTGTTCCCTTTAACATTGCCTCTTACGCTCTACTCACCTACATGATAGCCA 15088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583036392580