Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq16 89.7 1e-12
>seq16
Length=109755
Score = 89.7 bits (98), Expect = 1e-12
Identities = 271/411 (66%), Gaps = 16/411 (4%)
Strand=Plus/Plus
Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGA 35389
|| |||||| | | |||||| |||||||||| ||||| ||| | | ||||
Sbjct 14680 CATATCTGGGAAGGTAATGGATCGCGGGAATACTTGGATTCCCTAGGACTCAAGAGTAGA 14739
Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT 35449
||||| |||||||| || | ||||||||||||||| | ||||| |||||| | |||
Sbjct 14740 CGAGAGGATGATTTGGGTCCTATCTACGGATTCCAATGGAGACATTTCGGTGCTAAGTAT 14799
Query 35450 GATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAG 35509
| ||| | |||| ||||| ||| | || |||||||| | || | || | |
Sbjct 14800 GTCGATTGTGATACCGACTATACCGGACAAGGATTTGATCAAATCGCTACCATTATTCAT 14859
Query 35510 ACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568
|| || | ||| ||||| | |||||||| || || | | || ||||||||| |
Sbjct 14860 ACTCT-AAAGACCAATCCTTACGATAGAAGAATCATACTATCAGCTTGGAATCCTCCCGC 14918
Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACAT-GACTGCTCAATTTTATGT-GGCT--- 35623
| | | ||||| || ||||| || ||| | |||| || || || || |||
Sbjct 14919 TTTCAAAGAAATGGCACTACCTCCGTGTCACGTCTTCTGC-CAGTTCTACGTCAGCTTTA 14977
Query 35624 AAT-GGAGAA-------TTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGG 35675
||| ||| || ||| |||||| |||| ||| || | ||| | || | |
Sbjct 14978 AATCGGACAAGCCGAGGTTGAATTGCCAGATGTACCAGAGATCGTGCGATATGGGTCTTG 15037
Query 35676 GCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCA 35726
| || ||||| || ||||| || ||| |||| || || | |||| ||||
Sbjct 15038 GTGTTCCCTTTAACATTGCCTCTTACGCTCTACTCACCTACATGATAGCCA 15088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583036392580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |