Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq12 293 3e-74
seq23 253 3e-62
>seq12
Length=1129233
Score = 293 bits (324), Expect = 3e-74
Identities = 751/1136 (66%), Gaps = 8/1136 (1%)
Strand=Plus/Minus
Query 79691 ACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 79750
|||| ||||| || || || ||||| ||||||||| ||||||| |||||||| || || |
Sbjct 52962 ACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCA 52903
Query 79751 TGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 79809
|||| |||||||| |||||| |||| | ||| | |||| | ||| | | || |||||
Sbjct 52902 TGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCT-GAGCC 52844
Query 79810 TTTATTATAGACTTGTATCTCTTTTCTC--TTTCGTATTGTGTATATAATCGTTCGAACT 79867
|| | || | | || | | | ||| | ||||| | || ||||| || ||||
Sbjct 52843 TTGACGGTA--CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACT 52786
Query 79868 CGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTC 79927
||||||| | || || | || ||| |||| || | | | | ||| | |
Sbjct 52785 CGTCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGAC 52726
Query 79928 CATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 79987
| | | || || || ||||| || | || |||||||| || ||| || | ||| |
Sbjct 52725 CGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCAC 52666
Query 79988 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 80047
|| | ||||| || || ||||||| | | ||| | ||| | | || || |
Sbjct 52665 GGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTG 52606
Query 80048 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTA 80107
||||| ||||||| || | || || | || |||| |||||| ||||| || || |
Sbjct 52605 CGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTGTTACCTCCTTGGTCGA 52546
Query 80108 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 80167
|||||| || ||||| || |||| | | |||||||||||||||||| || ||||| |
Sbjct 52545 CGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCGT 52486
Query 80168 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 80227
|||| |||| ||| || ||| ||||||||| || ||| | ||| || || |
Sbjct 52485 TGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATACCGC 52426
Query 80228 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTAT 80287
| || | || || || || || || ||| || ||||| |||||||| || || ||
Sbjct 52425 CGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAGAAT 52366
Query 80288 CATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 80347
| || |||| || | ||| ||| |||||| || || | || |||||||| |
Sbjct 52365 CGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCATTGA 52306
Query 80348 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 80407
| || || ||||||||||| || || | || |||| ||| || || ||||| ||
Sbjct 52305 ACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCGATGA 52246
Query 80408 CTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTC 80467
|| | ||||| ||||||||| || || || | ||| | || || || ||||
Sbjct 52245 CTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGTGGTC 52186
Query 80468 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAA 80527
| || | | || ||| ||| |||| | || || ||||| ||||| |||||||
Sbjct 52185 TCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAACCAA 52126
Query 80528 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 80587
| |||||||| ||||| || |||||| |||| | ||||| | | ||| || | |
Sbjct 52125 AGTAGTTGTAGTTGAAGTCACGGTCGTAATTAATGGCAGAGTTCAACTCATCTTTGTGTC 52066
Query 80588 TGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 80647
| | ||| || ||| | || | || ||| | ||| |||| ||||
Sbjct 52065 TCATCACTGTGTCATAGGTAAGTTGCGAGACCATAGGACATGCCTTCTTGGTTTTCGGAT 52006
Query 80648 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 80707
|| || || | | |||| | || || || ||||| ||||| | |||||| |
Sbjct 52005 TATAGTAACTGTAGAGCTCCTGGACAACATCCGAGAAGAGTTTCTTTGTCTGCTTGTGCA 51946
Query 80708 GATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAG 80767
||| || | ||| | ||||||||| |||||||||||||| ||||| ||||| || |
Sbjct 51945 AATTCGAAATGGCGAGTCTGGCGGCCAAAATGGCATAATCAGGATGGATCGTAGT-CATG 51887
Query 80768 T-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822
| || || | || |||| || | | || ||||| || || || || || | |||
Sbjct 51886 TACGCAGCGGTCTCAGCTGTCAAATTATCTAATTCAACTGTGGTAACCCCCTCATA 51831
Score = 158 bits (174), Expect = 2e-33
Identities = 951/1503 (63%), Gaps = 68/1503 (5%)
Strand=Plus/Plus
Query 78736 GATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAG 78795
||||| | | ||| | |||||| ||||| || || || || || |||| | |||
Sbjct 996521 GATGCAGCCTGCGTCCTTAGATAATACATACCTGTCTTAAGTCCCTTCTTCCAAGCATAG 996580
Query 78796 AAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTATATGGATATTCATAGATTG 78854
|||||||| || || || || || || | | | | || || | ||||| | |||
Sbjct 996581 AAATGCATGCTGGTAAGCTTTGACATGGAACAGGTACG-TAAATAAAGATTCAGACTTTG 996639
Query 78855 ACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAAT 78914
|||||| ||| | | | || ||||| ||||| | ||||| | |||| ||
Sbjct 996640 CGATTGATCAATGTATGGAGCTCTATCTGCTGCCATATCAATGATTACTCTCTGTGATAT 996699
Query 78915 TTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAAT 78971
||||| | ||| ||| | ||| || || ||||| | ||| |||||
Sbjct 996700 CTCCCATACTGTTCGATACATATCCTTCATGAATTGTGGAATAGACGAGATATCTTGAAT 996759
Query 78972 GGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGT 79031
|||||| |||| | ||| || |||||| ||| ||||| ||| | |||| |
Sbjct 996760 CGATCCATTCGCTGCAACTATCTGATCCTTGATTTCTCGGTTCCACAATCCTTTCTCAAT 996819
Query 79032 TAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 79091
||| | || ||||| ||||||| || ||| |||||||| || ||||| || ||
Sbjct 996820 CAAATCATCAACGAGATAATGATTAACCACCTGATGCTCTCCAGATAACACTCTTCGCGT 996879
Query 79092 GTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGA 79151
|| | || ||| ||| || | ||||| | ||| | ||| || | ||||||
Sbjct 996880 ATACACGTTGGAGGTTATTGGCTCAAAGCATTCAGTGAATCCTAGAATCTGTGAAGTTGA 996939
Query 79152 TGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATC 79211
||| || ||||| |||||| ||||| ||| || | || ||||| ||||| ||
Sbjct 996940 TGCAGTCGGCATTAATGCCACTAATAATGAATTCCTTAATCCATATGAATGAATTTTTTC 996999
Query 79212 TTTTAGAGATTCCCAATCCCAAA--GA-TCAGACG----GGACAACATTCC-----AAAG 79259
|| | | ||||||||| | || || | | || | ||||| | |
Sbjct 997000 CTTCAATCCCTTCCAATCCCATAATGACTCTGTCTCTTTGGGCTGGATTCCTGGCCACAT 997059
Query 79260 ATCATATTGTAGAATACCGTTACTAGCGTATG---ATCCTGTGTATGTTTCATAAGGTCC 79316
||||||||| || || || ||||| || |||| || ||||||| || ||
Sbjct 997060 ATCATATTGAAGTATTCC---ACTAGAAATTGGGGATCCCTCATAGCTTTCATATGGCCC 997116
Query 79317 TTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAAT 79376
||| || || | || | || || || || || | ||| ||||||| ||| ||
Sbjct 997117 TTCTTTCATAGCAAGCTCCATAGATGCTTCCAAGGCCCCATGATAGATGGTTTGGAAGAT 997176
Query 79377 CTTCTTATTGAGATCTTGTGC-TTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACG 79435
|| | |||||| || | || |||| | || |||| || | || | || |||||
Sbjct 997177 CTCCAAATTGAG-TCGTCTGGATTCTCGACTTCCAAACGGTAACTTCATTTCAAAAAACG 997235
Query 79436 CGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAG 79495
| ||||| | ||| ||||| |||| | | || || || || || ||||||| | |||
Sbjct 997236 CATCTGCAAGTCCCTGAACTCCAACAGCAATTGGCCTGTGCTTCATATTAGAGACCTCAC 997295
Query 79496 CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTT 79555
|||| | |||||| | |||||| | ||||||||| || | ||||
Sbjct 997296 ATTCTTTCAGAGGATATGCTCCGACATCTATGACCCGATTGAGATTATGAACAAGAACTT 997355
Query 79556 TGACCACATCCTTTAGTTTGAGAAAATCAAAT------CGTCCATCTATTACA-----AA 79604
|| |||| | ||||| | | || |||| |||||||| | | ||
Sbjct 997356 TGGTCACAGAATGGAGTTTCCGGAGATTAAATGTTGGCCGTCCATCACTAGCCCTCTCAA 997415
Query 79605 CAT-----GTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC--G 79657
||| | | | | || || |||| |||||| ||||| | |||| | || |
Sbjct 997416 CATAACTAGGTAATCCTAAC-GAGGCCAAATTACATACGGCAATTTCATC--CTTCGATG 997472
Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717
||||| | | ||| ||| || || | || |||||||| || || ||||| |
Sbjct 997473 AATATTCAACAACCTCACAGCAAAGATTCGAGGATTTGATGGTTCCCAAGTTCTGTTGGT 997532
Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777
| ||| ||| || |||||||||||||| | ||| ||||| || |||||| |||| |
Sbjct 997533 TCGACTTGGAGTTGCAGGCATCCTTATAAAGCAAGAAAGGAGTTCCTGTTTCAGTCTGTG 997592
Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC 79837
| || ||| | ||| || |||||| | | ||| | || | || |
Sbjct 997593 AAATTAGGATCTTCTCCCACACTTTACGAGCCCTCACCT--GAC--GAATATAAGATCCC 997648
Query 79838 T----TTCGTATTGTGTA-TATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892
||| |||| || | || | | |||| || | ||||||| || ||||||
Sbjct 997649 CGCGATTCATATT-TGCAGTAGAGTTGTTCAAAGGATTTTCCCCAACAGTCAGATAATCC 997707
Query 79893 AGGACAT---TCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949
|||||| || || | | ||| | ||| || |||| | | || ||||||||
Sbjct 997708 AGGACAGGTATCCTCCGAAAACAGGCTC---CACACTTCATCGTTTTCCACACGTTTCAT 997764
Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTC 80008
|| | ||| || ||||||||||| ||| ||||| || |||| || ||| || || |
Sbjct 997765 GAACAAATCTGGGATCCAAAGAGC-ATAGAATAGGTCCCTGGCCCTCATCTCTTCCTTAC 997823
Query 80009 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068
| |||||||| | || | ||| |||| ||||| | |||||||||||| | |||
Sbjct 997824 CGTGGTTCTTTTTCAAGTCTAAGAATTCCATGATATCCGCATGCCACGGTTCTA--GATA 997881
Query 80069 TGGCC--ATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126
| | ||| | || |||||||| || || ||||| || | ||| |||||| | ||
Sbjct 997882 GGCACAGATAGCACCAGGTCGTTTATTACCACCCTGGTCAACATATTGAGCGGTACTGTT 997941
Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186
| |||| || ||| || | ||| ||| | ||| |||||||| || || |||||| |
Sbjct 997942 GAAGACTCGCAGCATAGGCACAATTCCACTTGATTCTCCATTGGTACCCGATATATAGGT 998001
Query 80187 TCC 80189
|||
Sbjct 998002 TCC 998004
>seq23
Length=838141
Score = 253 bits (280), Expect = 3e-62
Identities = 584/866 (67%), Gaps = 14/866 (2%)
Strand=Plus/Minus
Query 49690 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 49749
|||||||| || || || ||||| ||||||| || |||||||||||||| || |||||
Sbjct 743014 TTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTTTCCATGAAATCGAATGGATTT 742955
Query 49750 GTAACATTATAAAtttttttAAATCCCAATTC-AGAAATCAATCTATCCGCGACA-AATT 49807
||| | || || | ||| | | || | || || |||||| || || ||| || |
Sbjct 742954 GTAGCGTTGTAGACTTTGTCGCAGCCTAGGGAGAGTAA-CAATCTGTCGGC-ACAGAAGT 742897
Query 49808 CTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAG 49867
| | |||| | |||||| ||||||||||| || | || ||| || | || |
Sbjct 742896 CAACATATTGATACATCATATCACAATTCATACCCAAGAGAGAAACAGGTAATGCATCTC 742837
Query 49868 TA-AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCA 49926
| ||||| |||| |||||| || || || || || || | | | ||| | |
Sbjct 742836 TCCAGAAAGTCTT-TTCAATATCCACAGCTTCAGTCATGATCTTGGTGATGATTTTCTTA 742778
Query 49927 CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCG 49986
| || || || ||||| || | | || ||||||||| || | ||| |||
Sbjct 742777 TTAGGAGGGTGTTTCAAATGAGAGAATAATAGGCAGGCGAAATCGGTATGTAAACCTTCG 742718
Query 49987 TCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 50046
||||| | || |||||||| || || || || || ||||| | || | ||| || |||
Sbjct 742717 TCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGCATCAAACCTCTCTTCTTTAGC 742658
Query 50047 CAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACA 50106
||||| |||| ||||||||| || || ||||||| ||||| | ||||| ||||| ||
Sbjct 742657 CAAAAGATGGCCGCAAATGAACCGGAGAAGAAGACACCTTCGATAGCGGCGAAGGCGACC 742598
Query 50107 AGTCTCTCTCCATA-ACTGGCGCTGTCATGT--ATCCACTTTTGAGCCCAATCGGCCTTC 50163
| ||| ||| | || | || | | ||| ||||| ||||||| |||||
Sbjct 742597 AATCTTTCTGCGTATAGTGCATCCTTGCTGTTGATCCAACGAAGAGCCCATAATGCCTTT 742538
Query 50164 TTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCT 50223
| || | || || ||||| ||||||||||| | || | ||| || |||||
Sbjct 742537 TCCTTAATTGGGGGAATAGTTTCAATGGCATTAAATAAGTAATCAGATTCCTTCTTATCT 742478
Query 50224 TTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATC 50283
| || || || || | ||| ||| ||| | || ||||| ||||| || | |||
Sbjct 742477 GTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCTCAGAATGGATGTTCTCCACCATGATC 742418
Query 50284 TGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC-TTCTGTACAAAATCGTTCAGC 50342
|| ||||||||||| |||||||| | | ||| || |||||| || | || |
Sbjct 742417 TGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCTGAACGTTCTGTGTGAAGT-TTTGAAT 742359
Query 50343 TAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 50402
||||| |||| || || || ||| ||| ||||| || ||||| ||| || || ||
Sbjct 742358 CAAATTCTCATCAACGATACCATCAGAGGCGGCAAAGAAGGCCAACACACGTGCGATGAA 742299
Query 50403 ATGTTTTTCGTTGGGTGTTAG---TTTATTCCAATCATTGATATCTTTAGATATATCTAC 50459
|| | |||| |||| | || || ||||| ||| | ||| || || | ||| |
Sbjct 742298 ATATCTTTCATTGGCATTAAGCTTGTTCTTCCAGTCAGGAACATCCTTTGAGAGATCGAT 742239
Query 50460 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 50519
|||||| | ||||| || ||||| || ||||| || ||||| | ||| || |||| ||
Sbjct 742238 CTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACATCTGCCAAATATCATCGTA 742179
Query 50520 TTGGATTGGGAAAATAACAAATCTAT 50545
|||||| ||||| || ||||||||||
Sbjct 742178 TTGGATAGGGAACATGACAAATCTAT 742153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268117644640
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