Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq45 93.3 3e-14
seq1 86.0 5e-12
>seq45
Length=579175
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978
|||||||| | ||||| |||||||| || | |||| |||||||| || || |||||
Sbjct 354919 TCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAG 354978
Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038
||||||| ||| ||||| | || | || || || || ||| || ||||| ||
Sbjct 354979 ATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTG 355038
Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098
||| || || || |||||| || | || || || || || || | || || ||
Sbjct 355039 TCAATGGTATCAGAAGACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACG 355098
Query 43099 AAAATTTGCATTTTCT 43114
||||||||||||||||
Sbjct 355099 AAAATTTGCATTTTCT 355114
>seq1
Length=1746572
Score = 86.0 bits (94), Expect = 5e-12
Identities = 164/242 (68%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || || || || | ||| ||||| || | ||||| || |||
Sbjct 813832 CCACCTCTCAATCTCAAGACTAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 813891
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
||||| | | || ||||| || || || ||||| ||||||| ||| ||||| | ||
Sbjct 813892 AATGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 813951
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || || || || |||| || ||||| || ||| ||||| || ||| ||
Sbjct 813952 ATTCCCTCCTTGTCTTGGATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGACTCAACC 814011
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTA 43122
|| | || || || || ||||| | || || || ||||||||||| || ||| |||
Sbjct 814012 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAAATTTGCATATTGATAAGTTTC 814071
Query 43123 TT 43124
||
Sbjct 814072 TT 814073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369246756408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |