Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq12 280 2e-70
seq23 232 9e-56
>seq12
Length=1129233
Score = 280 bits (310), Expect = 2e-70
Identities = 748/1136 (66%), Gaps = 8/1136 (1%)
Strand=Plus/Minus
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
|||||||||| || || || ||||| ||||||||| ||||||| |||||||| || || |
Sbjct 52962 ACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCA 52903
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 71892
| || |||||||| |||||| |||| | ||| | |||| | ||| | | || |||||
Sbjct 52902 TGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCT-GAGCC 52844
Query 71893 TTTATTATATTCTTGTATCTCTTTTCTC--TTTCGTATTGTGTATATAATCGTTCGAACT 71950
|| | || | | || | | | ||| | ||||| | || ||||| || ||||
Sbjct 52843 TTGACGGTA--CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACT 52786
Query 71951 CGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010
||||||| | | | | || ||| ||| || | | | | ||| | |
Sbjct 52785 CGTCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGAC 52726
Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070
| | | | || || ||||| || | || |||||||| || ||| || | ||| |
Sbjct 52725 CGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCAC 52666
Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 72130
|| | ||||| || || ||||||| | | ||| | ||| | | || || |
Sbjct 52665 GGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTG 52606
Query 72131 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTA 72190
||||| ||||||| || | || || | || || | |||||| ||||| || || |
Sbjct 52605 CGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTGTTACCTCCTTGGTCGA 52546
Query 72191 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 72250
|||||| || ||||| || |||| | | |||||||||||||||||| || | ||| |
Sbjct 52545 CGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCGT 52486
Query 72251 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCC 72310
|||| |||| ||| || ||| ||||||||| ||| ||| | ||| || || |
Sbjct 52485 TGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATACCGC 52426
Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370
| || | || || || || || || ||| || ||||| |||||||| || ||| ||
Sbjct 52425 CGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAGAAT 52366
Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430
| ||| |||| || | ||| ||| |||||| || || | || |||||||| |
Sbjct 52365 CGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCATTGA 52306
Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490
| || || ||||||||||| || || | || |||| ||| || || ||||| ||
Sbjct 52305 ACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCGATGA 52246
Query 72491 CTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550
|| | ||||| ||| ||||| || || || | ||| | || ||| || ||||
Sbjct 52245 CTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGTGGTC 52186
Query 72551 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 72610
| || | | || ||| ||| |||| | ||||| ||||| ||||| |||||||
Sbjct 52185 TCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAACCAA 52126
Query 72611 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATT 72670
| |||||||| ||||| || |||||| |||| | || || | | ||| || | |
Sbjct 52125 AGTAGTTGTAGTTGAAGTCACGGTCGTAATTAATGGCAGAGTTCAACTCATCTTTGTGTC 52066
Query 72671 TGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 72730
| | ||| | || ||| | || | || ||| | ||| |||| ||||
Sbjct 52065 TCATCACTGTGTCATAGGTAAGTTGCGAGACCATAGGACATGCCTTCTTGGTTTTCGGAT 52006
Query 72731 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 72790
|| || || | | |||| | || || || ||||| ||||| | |||||| |
Sbjct 52005 TATAGTAACTGTAGAGCTCCTGGACAACATCCGAGAAGAGTTTCTTTGTCTGCTTGTGCA 51946
Query 72791 GATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAG 72850
||| || | ||| | ||||||||| | |||||||||||| ||||| ||||| || |
Sbjct 51945 AATTCGAAATGGCGAGTCTGGCGGCCAAAATGGCATAATCAGGATGGATCGTAGT-CATG 51887
Query 72851 T-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905
| || || | || |||| || | | || ||||| || || || || || | |||
Sbjct 51886 TACGCAGCGGTCTCAGCTGTCAAATTATCTAATTCAACTGTGGTAACCCCCTCATA 51831
Score = 154 bits (170), Expect = 2e-32
Identities = 719/1113 (65%), Gaps = 59/1113 (5%)
Strand=Plus/Plus
Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433
||||| |||| | || ||||| |||||||| || || || | || || ||
Sbjct 997091 GATCCCTCATAGCTTTCATATGGCCCTTCTTTCATAGCAAGCTCCATAGATGCTTCCAAG 997150
Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGC-TTCCGGGCTATC 71492
|| |||| ||| ||||||| ||| |||| | |||||| || | || ||| | || |
Sbjct 997151 GCCCCATGATAGATGGTTTGGAAGATCTCCAAATTGAG-TCGTCTGGATTCTCGACTTCC 997209
Query 71493 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGG 71552
||| || | || | || |||||| ||||| | ||| ||||| |||| | | || ||
Sbjct 997210 AAACGGTAACTTCATTTCAAAAAACGCATCTGCAAGTCCCTGAACTCCAACAGCAATTGG 997269
Query 71553 TCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 71612
||||| || ||||||| | ||| |||| | |||||| | |||||| |
Sbjct 997270 CCTGTGCTTCATATTAGAGACCTCACATTCTTTCAGAGGATATGCTCCGACATCTATGAC 997329
Query 71613 TTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCT 71672
||||||||| || | |||||| |||| | ||||| | | || |||| |
Sbjct 997330 CCGATTGAGATTATGAACAAGAACTTTGGTCACAGAATGGAGTTTCCGGAGATTAAATGT 997389
Query 71673 C--CCATCTATTACAAACACGTTCAAGGCAACA-------------GATGCCAGATTACA 71717
|| || || || | | | |||| ||| || |||| ||||||
Sbjct 997390 TGGCCGTCCATCACTAGCCCTCTCAACATAACTAGGTAATCCTAACGAGGCCAAATTACA 997449
Query 71718 AACGGCTACCTCATTAGCATCG--GCATATTGTATAATTTCAGTGCAAAGATTACTACAC 71775
||||| | |||| | ||| | ||||| | || ||| ||||||||| |
Sbjct 997450 TACGGCAATTTCATC--CTTCGATGAATATTCAACAACCTCACAGCAAAGATTCGAGGAT 997507
Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835
||||||||||| || || ||||| || ||| ||| || |||||||||||||| |
Sbjct 997508 TTGATGGTTCCCAAGTTCTGTTGGTTCGACTTGGAGTTGCAGGCATCCTTATAAAGCAAG 997567
Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 71895
|| ||||| || |||||| |||| || || ||| | ||| || |||||| |
Sbjct 997568 AAAGGAGTTCCTGTTTCAGTCTGTGAAATTAGGATCTTCTCCCACACTTTACGAGCCCTC 997627
Query 71896 A--TTAT-ATTCTTGTATCTCTTTTCTCT-TTCGTATTGTGTA-TATAATCGTTCGAACT 71950
| | | | | | ||| | | | ||| |||| || | || | | |||| ||
Sbjct 997628 ACCTGACGAATATAAGATCCC----CGCGATTCATATT-TGCAGTAGAGTTGTTCAAAGG 997682
Query 71951 CGTCTCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACT 72007
| ||||||| || ||| |||||||||||| || | | | || ||||
Sbjct 997683 ATTTTCCCCAA-CA--GTCAGATAATCCAGGACAGGTATCCTCCGAAAACAGGCTCCACA 997739
Query 72008 CTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGA 72066
|| |||| | | || |||||||| || | ||| || ||||||||||| ||| |||||
Sbjct 997740 CTTCATCGTTTTCCACACGTTTCATGAACAAATCTGGGATCCAAAGAGC-ATAGAATAGG 997798
Query 72067 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 72126
|| |||| || ||| || || || |||||||| | || | ||| |||| |||
Sbjct 997799 TCCCTGGCCCTCATCTCTTCCTTACCGTGGTTCTTTTTCAAGTCTAAGAATTCCATGATA 997858
Query 72127 TCAGAATGCCACGGTTCCAAGTATATGGCC--ATAACTCCCGGCCGTTTGTTTCCTCCCT 72184
|| | |||||||||||| | ||| | | ||| | || || ||||| || || ||||
Sbjct 997859 TCCGCATGCCACGGTTCTA--GATAGGCACAGATAGCACCAGGTCGTTTATTACCACCCT 997916
Query 72185 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 72244
| || | ||| |||||| | || | |||| || ||| || | ||| ||| | |||
Sbjct 997917 GGTCAACATATTGAGCGGTACTGTTGAAGACTCGCAGCATAGGCACAATTCCACTTGATT 997976
Query 72245 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGC-TAATTGATAGACCT 72303
| |||||||| || || |||||| |||| || | | ||||| ||| || | |||
Sbjct 997977 CTCCATTGGTACCCGATATATAGGTTCCTGCTGCCCTTACATTGCTTAAATG-CATACCA 998035
Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCCTC 72362
||||| || || ||| || || | || ||| | | ||| ||| | |||| || ||
Sbjct 998036 ATTCCACCGGCAGCTTTCGATATCATAGCACAT-TTGTGAACTGTACGAAAGATCCCATC 998094
Query 72363 TATACTATCATCC-ATCATGTTAAGTAGAAAACA----GCTAGACATTTGGTGACGACT- 72416
|| | |||||| | ||| || || ||||| | |||| |||| || |||
Sbjct 998095 TAGAGAGTCATCCTCTAATG-AAACCAGGAAACATGACGATAGA---TTGGGGA--ACTC 998148
Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449
||| |||||||| || | ||| || || || ||
Sbjct 998149 AGTACCCGCATTGAAAAGGGTGGGTGATGCATG 998181
>seq23
Length=838141
Score = 232 bits (256), Expect = 9e-56
Identities = 582/871 (67%), Gaps = 24/871 (3%)
Strand=Plus/Minus
Query 41795 TTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 41854
|||||||| || || |||||||| ||||||| || |||||||||||||| || |||||
Sbjct 743014 TTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTTTCCATGAAATCGAATGGATTT 742955
Query 41855 GTAACATTATAAAtttttttAAATCCCAATTC-AGAAATCAATCTATCTGCGATGAATTC 41913
||| | || || | ||| | | || | || || |||||| || || ||| ||
Sbjct 742954 GTAGCGTTGTAGACTTTGTCGCAGCCTAGGGAGAGTAA-CAATCTGTCGGCACAGAAGTC 742896
Query 41914 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT 41973
| |||| | |||||| ||||||||||| || | || ||| || | || | |
Sbjct 742895 AACATATTGATACATCATATCACAATTCATACCCAAGAGAGAAACAGGTAATGCATCTCT 742836
Query 41974 A-AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTG-----TTTC 42027
||||| |||| ||||||| || || || || || |||||| || ||||
Sbjct 742835 CCAGAAAGTCTT-TTCAATATCCACAGCTTCAGTCAT----GATCTTGGTGATGATTTTC 742781
Query 42028 TTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACC 42087
|| | | || || | ||||| || | | || ||||||||| || | |||
Sbjct 742780 TT-ATTAGGAGGGTGTTTCAAATGAGAGAATAATAGGCAGGCGAAATCGGTATGTAAACC 742722
Query 42088 CTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 42147
|| ||||| | || | |||||| || || || || || ||||| | || | ||| ||
Sbjct 742721 TTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGCATCAAACCTCTCTTCTT 742662
Query 42148 AAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207
|||||||| || | ||||||||| || || ||||||| ||||| | || || |||||
Sbjct 742661 TAGCCAAAAGATGGCCGCAAATGAACCGGAGAAGAAGACACCTTCGATAGCGGCGAAGGC 742602
Query 42208 AATAAGTCTCTCTCCATAACCGGCA-CTGTCATGT--ATCCACTTTTGAGCCCAATCGGC 42264
| | ||| ||| | || ||| | | ||| ||||| ||||||| ||
Sbjct 742601 GACCAATCTTTCTGCGTATAGTGCATCCTTGCTGTTGATCCAACGAAGAGCCCATAATGC 742542
Query 42265 CTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT 42324
||| | || | || || ||||| ||||||||||| | || | ||| || |
Sbjct 742541 CTTTTCCTTAATTGGGGGAATAGTTTCAATGGCATTAAATAAGTAATCAGATTCCTTCTT 742482
Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384
|||| | || || || || | ||| ||| ||| | || ||||| ||||| || |
Sbjct 742481 ATCTGTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCTCAGAATGGATGTTCTCCACCAT 742422
Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC-TTCTGTACAAAATCGTT 42443
||||| ||||||||||| || ||||| | | ||| || |||||| || | ||
Sbjct 742421 GATCTGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCTGAACGTTCTGTGTGAAGT-TTT 742363
Query 42444 CAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 42503
| ||||| || | || || || ||| ||| ||||| || ||||| ||| || |
Sbjct 742362 GAATCAAATTCTCATCAACGATACCATCAGAGGCGGCAAAGAAGGCCAACACACGTGCGA 742303
Query 42504 TAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCAATCATTGATATCTTTAGATATA 42559
| |||||| |||| | || |||| || ||||| ||| | ||| || || | |
Sbjct 742302 TGAAATATCTTTCAT-TGGCATTAAGCTTGTTCTTCCAGTCAGGAACATCCTTTGAGAGA 742244
Query 42560 TCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCA 42619
|| | ||||| | ||||| || |||||||| ||||| || ||||| | ||| ||||||
Sbjct 742243 TCGATCTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACATCTGCCAAATATCA 742184
Query 42620 TGATATTGAATTGGGAAAATAACAAATCTAT 42650
| ||||| || ||||| || ||||||||||
Sbjct 742183 TCGTATTGGATAGGGAACATGACAAATCTAT 742153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138562417760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |