Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq23 141 1e-28
seq16 131 2e-25
>seq23
Length=838141
Score = 141 bits (156), Expect = 1e-28
Identities = 395/592 (67%), Gaps = 23/592 (4%)
Strand=Plus/Plus
Query 124980 AGCAGTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAG 125039
|||| ||||||| | |||| || ||| || |||| |||||| | |||||||| |||
Sbjct 742150 AGCA-TAGATTTGTCATGTTCCCTATCCAATACGATGATATTTGGCAGATGTACAAGAAG 742208
Query 125040 GCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTAC--GATT 125097
||| | || || || ||||| | |||||| ||||||| || ||||| ||| | || |
Sbjct 742209 GCTGAAGCATCTTTCTGGACTGCGGAAGAGATCGATCTCTCAAAGGA--TGTTCCTGACT 742266
Query 125098 GGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTT--TGGCCTTCT 125154
|| ||| | | || | || | ||| || | || || ||||| | | |||||||||
Sbjct 742267 GGAAGAACAAGCTTAA-TGCCAATGAAAGATATTTCAT--CGCACGTGTGTTGGCCTTCT 742323
Query 125155 TTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCA-AGAGTTG 125213
|||||| ||| ||||| ||||| | || ||| || | | ||| | || | |||
Sbjct 742324 TTGCCGCCTCTGATGGTATCGTTGATGAGAATTTGATTCAAAACTTCACACAGAACGTTC 742383
Query 125214 ACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCG 125273
| | | ||||||| | ||| ||||||||||| |||||| | |||||| | || ||
Sbjct 742384 AGC-TGCCAGAGGCTAGGGCCTTCTACGGATTCCAGATCATGGTGGAGAACATCCATTCT 742442
Query 125274 GAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACAT--GC 125331
|| | || ||| || |||| | ||| | ||| | | | || | ||
Sbjct 742443 GAGACCTATTCTCTCTTGCTTGAAACCTACGTGACAGATAAG--AAGGAATCTGATTACT 742500
Query 125332 TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGT 125391
| ||||| || || || || | || | || ||||||| ||||| |||| |
Sbjct 742501 TATTTAATGCCATTGAAACTATTCCCCCAATTAAGGAAAAGGCATTATGGGCTCTTCGTT 742560
Query 125392 GGATCGATGACGACAAGTCTTC---GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAG 125448
||||| || |||| | | ||||| || ||| |||| || |||||||| | |
Sbjct 742561 GGATC---AACAGCAAGGATGCACTATACGCAGAAAGATTGGTCGCCTTCGCCGCTATCG 742617
Query 125449 AGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCA 125508
| || ||||||| || ||| |||||||||||||||||||| |||||| | || | |
Sbjct 742618 AAGGTGTCTTCTTCTCCGGTTCATTTGCGGCCATCTTTTGGCTAAAGAAGAGAGGTTTGA 742677
Query 125509 TGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACA 125560
|||| || || || | ||||| |||| | ||||||| || ||||
Sbjct 742678 TGCCAGGTCTTACCTTCTCGAACGAACTTATCTGCAGAGACGAAGGTTTACA 742729
>seq16
Length=109755
Score = 131 bits (144), Expect = 2e-25
Identities = 238/345 (69%), Gaps = 14/345 (4%)
Strand=Plus/Plus
Query 70034 TTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTC 70093
|||||||| || || ||| |||| ||||| ||| |||| || | |||||||||
Sbjct 14713 TTGGATTCCCTAGGACTCAAGAGTAGACGAGAGGATGATTTGGGTCCTATCTACGGATTC 14772
Query 70094 CAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGT 70153
|| ||||| || | || | |||||||| || || || || |||||| | || || ||
Sbjct 14773 CAATGGAGACATTTCGGTGCTAAGTATGTCGATTGTGATACCGACTATACCGGACAAGGA 14832
Query 70154 GTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATC 70213
|||||||| | || || ||| | ||||| ||||||||||| ||||| || |||
Sbjct 14833 TTTGATCAAATCGCTACCATTATTCATACTCTAAAGACCAATCCTTACGATAGAAGAATC 14892
Query 70214 GTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCAC-TG 70272
|| | | | ||||||||| | | ||| | ||||||||||||| ||||||||| |
Sbjct 14893 ATACTATCAGCTTGGAATCCTCCCGCTTTCAAAGAAATGGCACTACCTCCGTGTCACGTC 14952
Query 70273 TTTGGC----------TCAG-TTTTACTCGTACGATGGCAAATTGTCATGCTTAATGTAT 70321
|| || |||| ||| | ||| || | | ||| ||| |||||
Sbjct 14953 TTCTGCCAGTTCTACGTCAGCTTTAAATCGGACAAGCCGAGGTTGAATTGCCAGATGTAC 15012
Query 70322 CAGAG-GAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGC 70365
||||| ||| ||| ||||| || ||||| ||||||||||||||
Sbjct 15013 CAGAGATCGTG-CGATATGGGTCTTGGTGTTCCCTTTAACATTGC 15056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058495993760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |