Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq45 95.1 1e-14
seq15 91.5 1e-13
>seq45
Length=579175
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || || | ||||| || | ||| ||||| ||||| |||||||| ||| |
Sbjct 354883 CCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGAC 354942
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| | || |||||||| || || ||| | || | ||||| ||||| ||
Sbjct 354943 AAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 355002
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| || || || || ||| || || || || | | ||| | ||| || || |
Sbjct 355003 ATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACT 355062
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| ||||||||| || || ||||| || || || ||||||||||||||
Sbjct 355063 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 355112
>seq15
Length=115448
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 19991 AACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTA 20050
|||||||| ||||| || || ||||| || || || || ||||| || | ||| ||
Sbjct 462 AACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAAAGTGTTCTA 403
Query 20051 GAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCT 20110
|||||| || || || || ||| | || | ||||| ||||| || | ||||||
Sbjct 402 CCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGAATACCTTCT 343
Query 20111 TTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTA 20170
|| || || ||||||||||| | | | | || || ||| ||||| |||
Sbjct 342 TTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACTTCCAAGGTG 283
Query 20171 ATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||||||||| || || || ||||| ||||| |||||
Sbjct 282 ATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| ||||| || || ||||| || || || || ||||| ||
Sbjct 243 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 184
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| || |||||| || || || || ||| | || | ||||| ||||| ||
Sbjct 183 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 124
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| |||||||| || || ||||||||||| | | | | ||| || || |
Sbjct 123 ATACCTTCTTTATCTTGGATCTTTTGTTTCACATTATCGATCGTATCAGAAGACTCGACT 64
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| ||| ||||| || || ||||| || ||||| ||||| |||||
Sbjct 63 TCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTGCAT 17
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419586811357356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |