Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq37 116 6e-22
seq10 96.9 5e-16
>seq37
Length=33090
Score = 116 bits (128), Expect = 6e-22
Identities = 177/251 (71%), Gaps = 1/251 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| ||| |||||||||| ||||| || || |||||||||||| | | ||||| |
Sbjct 22090 AGAT-TCTCAGAGATAACATTCAAGGTATTACGAAGCCAGCTATCAGAAGATTGGCTAGA 22032
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | |||| | ||| | ||||| || || | | |||| | |||
Sbjct 22031 AGAGGTGGTGTTAAGAGAATCTCCGCTTTGATTTATGAGGAAGTTAGAGCTGTTCTAAAG 21972
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| ||| |||||| ||||| | ||||| ||||| || || | |||
Sbjct 21971 ACTTTCCTTGAGAACGTTATTAGGGATGCCGTTACTTATACTGAGCATGCCAAGAGAAAG 21912
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|||||||| || ||||| | || ||||| || || | |||||| | | | |||||
Sbjct 21911 ACTGTCACTTCATTGGATGTTGTTTATGCTTTAAAGAGACAAGGCAGAACTTTGTATGGA 21852
Query 16688 TTTGGAAGTTA 16698
|||||| ||||
Sbjct 21851 TTTGGAGGTTA 21841
>seq10
Length=190340
Score = 96.9 bits (106), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||| ||||| ||||||||||| || ||| | | |||| |
Sbjct 3147 AGATC-CTTAGAGATAACATTCAAGGTATCACCAAGCCTGCCATCAGAAGATTGGCAAGA 3089
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | |||| | || | || || || | | | ||| || |||
Sbjct 3088 AGAGGTGGTGTTAAGAGAATCTCCGCTTTAATTTACGAGGAAGTCAGAGCTGTCTTAAAG 3029
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| ||| ||| ||| ||||| | ||||||||||| || || | |||
Sbjct 3028 ACTTTCCTTGAGAACGTCATCAGAGATGCCGTTACTTATACCGAGCATGCCAAGAGAAAG 2969
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662
||||| || || ||||| | |||||||| |||||
Sbjct 2968 ACTGTTACTTCTTTGGATGTTGTCTATGCTTTGAA 2934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075130512668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |