Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq12 269 3e-67
seq23 233 2e-56
>seq12
Length=1129233
Score = 269 bits (298), Expect = 3e-67
Identities = 746/1138 (66%), Gaps = 12/1138 (1%)
Strand=Plus/Minus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
||||||| || || || || ||||| ||||||||| ||||||| |||||||| || || |
Sbjct 52962 ACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCA 52903
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 63086
||||||||||||| |||||| |||| | ||| | |||| | ||| | | || |||||
Sbjct 52902 TGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCT-GAGCC 52844
Query 63087 TTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63146
|| | || | | | | || || ||||| | || || || || ||||||
Sbjct 52843 TTGACGGTACGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACTCG 52784
Query 63147 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63206
||||| | || | | || ||| ||| || | | | | ||| | |||
Sbjct 52783 TCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGACCG 52724
Query 63207 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63266
| | || || || ||||| || | || |||||||| || ||| || | ||| | |
Sbjct 52723 TTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCACGG 52664
Query 63267 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63326
| | |||||| || || ||||||| | | ||| | ||| | | || || |
Sbjct 52663 GCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTGCG 52604
Query 63327 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63386
||||| ||||||| || | || || | || || | |||||| ||||| || || | |
Sbjct 52603 TGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTGTTACCTCCTTGGTCGACG 52544
Query 63387 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63446
||||| || ||||| || |||| | | ||||||||||||||| ||||| |||| |||
Sbjct 52543 TATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCGTTG 52484
Query 63447 GTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63506
||||||| ||| || ||| ||||||||| || ||| | ||| || || ||
Sbjct 52483 GTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATACCGCCG 52424
Query 63507 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCA 63566
|| | || || || || || || ||| || || || ||||| || || || |||
Sbjct 52423 GCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAGAATCG 52364
Query 63567 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63626
|| |||| || | ||| ||| |||||| || || | || |||||||| ||
Sbjct 52363 TCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCATTGAAC 52304
Query 63627 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63686
|| || ||||||||||| || || | || || | ||| || || ||||| | |
Sbjct 52303 AAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTC----GAT 52248
Query 63687 GAGTCT----ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63742
|| ||| ||||| ||||||||| || || || | ||| | || || || ||
Sbjct 52247 GACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGTGG 52188
Query 63743 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63802
||| || | | || || ||| |||| | ||||| ||||| ||||| |||||
Sbjct 52187 TCTCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAACC 52128
Query 63803 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATA 63862
||| |||||||| ||||| || |||||| |||| | ||||| | | ||| || |
Sbjct 52127 AAAGTAGTTGTAGTTGAAGTCACGGTCGTAATTAATGGCAGAGTTCAACTCATCTTTGTG 52068
Query 63863 TTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 63922
| | | ||| | || ||| | || | || ||| | ||| |||| ||
Sbjct 52067 TCTCATCACTGTGTCATAGGTAAGTTGCGAGACCATAGGACATGCCTTCTTGGTTTTCGG 52008
Query 63923 ATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTG 63982
|||| || || | | |||| | || || || ||||| ||||| | ||||||
Sbjct 52007 ATTATAGTAACTGTAGAGCTCCTGGACAACATCCGAGAAGAGTTTCTTTGTCTGCTTGTG 51948
Query 63983 TAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 64042
| ||| || | ||| | ||||||||| | |||||||||||| ||||| ||||| ||
Sbjct 51947 CAAATTCGAAATGGCGAGTCTGGCGGCCAAAATGGCATAATCAGGATGGATCGTAGT-CA 51889
Query 64043 AGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64099
|| || || | || |||| || | | || ||||| || || || || || | |||
Sbjct 51888 TGTACGCAGCGGTCTCAGCTGTCAAATTATCTAATTCAACTGTGGTAACCCCCTCATA 51831
Score = 141 bits (156), Expect = 1e-28
Identities = 596/925 (64%), Gaps = 37/925 (4%)
Strand=Plus/Plus
Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627
||||| |||| | || ||||| ||||| ||| ||| || || | || || ||
Sbjct 997091 GATCCCTCATAGCTTTCATATGGCCCTTCTTTCATAGCAAGCTCCATAGATGCTTCCAAG 997150
Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC-TTCCAGGCTATC 62686
|| || | ||| ||||||| |||||||| | ||| || || | || ||| | || |
Sbjct 997151 GCCCCATGATAGATGGTTTGGAAGATCTCCAAATTGAG-TCGTCTGGATTCTCGACTTCC 997209
Query 62687 AAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746
||| || | || | || |||||| || || | ||| ||||| |||| | | || ||
Sbjct 997210 AAACGGTAACTTCATTTCAAAAAACGCATCTGCAAGTCCCTGAACTCCAACAGCAATTGG 997269
Query 62747 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62806
|| || || ||||||||| ||| |||| | |||||| | |||||| |
Sbjct 997270 CCTGTGCTTCATATTAGAGACCTCACATTCTTTCAGAGGATATGCTCCGACATCTATGAC 997329
Query 62807 TTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC- 62865
||||||||| |||| |||||| |||| | ||||| | | || ||||
Sbjct 997330 CCGATTGAGATTATGAACAAGAACTTTGGTCACAGAATGGAGTTTCCGGAGATTAAATGT 997389
Query 62866 -GCCCATCTATTACAAACATGTTCAAGGCAACA-------------GATGCCAGATTACA 62911
| || || || || | | |||| ||| || |||| ||||||
Sbjct 997390 TGGCCGTCCATCACTAGCCCTCTCAACATAACTAGGTAATCCTAACGAGGCCAAATTACA 997449
Query 62912 AACGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACAC 62969
||||| | |||| | || | ||||| | | |||| ||||||||| |
Sbjct 997450 TACGGCAATTTCATC--CTTCGATGAATATTCAACAACCTCACAGCAAAGATTCGAGGAT 997507
Query 62970 TTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 63029
||||| ||||| || || ||||| || ||| ||| || |||||||||||||| | |
Sbjct 997508 TTGATGGTTCCCAAGTTCTGTTGGTTCGACTTGGAGTTGCAGGCATCCTTATAAAGCAAG 997567
Query 63030 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 63089
|| ||||| || |||||| |||| || || ||| | ||| || |||||| |
Sbjct 997568 AAAGGAGTTCCTGTTTCAGTCTGTGAAATTAGGATCTTCTCCCACACTTTACGAGCCCTC 997627
Query 63090 ATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTGTA-TACAATCGTTCGAACTCGT 63147
| | || | | ||| | || | ||| || | || | | |||| || |
Sbjct 997628 ACCTGACGAATATAAGATCCCCGCGATT-CATATT-TGCAGTAGAGTTGTTCAAAGGATT 997685
Query 63148 CTCCCCAAACATTGTCC---AATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63204
||||||| || ||| ||||||||||| |||| | | || |||| ||
Sbjct 997686 TTCCCCAA-CA--GTCAGATAATCCAGGACAGGTATCCTCCGAAAACAGGCTCCACACTT 997742
Query 63205 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCT 63263
| || | | ||| |||||||| || | ||| || ||||||||||| ||| ||||| ||
Sbjct 997743 CATCGTTTTCCACACGTTTCATGAACAAATCTGGGATCCAAAGAGC-ATAGAATAGGTCC 997801
Query 63264 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63323
|||| || || || || || |||||||| | || | ||| |||| |||||
Sbjct 997802 CTGGCCCTCATCTCTTCCTTACCGTGGTTCTTTTTCAAGTCTAAGAATTCCATGATATCC 997861
Query 63324 GAATGCCACGGTTCCAAGTATATGGCC--ATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 63381
| |||||||||||| | ||| | | ||| | ||||| ||||| || || ||||| |
Sbjct 997862 GCATGCCACGGTTCTA--GATAGGCACAGATAGCACCAGGTCGTTTATTACCACCCTGGT 997919
Query 63382 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATAC 63441
| | ||| |||||| | || | |||| || ||| || | ||| || ||||| |
Sbjct 997920 CAACATATTGAGCGGTACTGTTGAAGACTCGCAGCATAGGCACAATTCCACTTGATTCTC 997979
Query 63442 CATTGGTACCGGAGATATAGCTTCC 63466
|||||||||| || |||||| ||||
Sbjct 997980 CATTGGTACCCGATATATAGGTTCC 998004
>seq23
Length=838141
Score = 233 bits (258), Expect = 2e-56
Identities = 580/869 (67%), Gaps = 20/869 (2%)
Strand=Plus/Minus
Query 33034 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33093
|||||||| || || || ||||| ||||||| || |||||||||||||| || |||||
Sbjct 743014 TTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTTTCCATGAAATCGAATGGATTT 742955
Query 33094 GTAACATTATAAAtttttttAAATCCCAATTC-AGAAATCAATCTATCCGCGACGAATTC 33152
||| | || || | ||| | | || | || || |||||| || || ||| ||
Sbjct 742954 GTAGCGTTGTAGACTTTGTCGCAGCCTAGGGAGAGTAA-CAATCTGTCGGCACAGAAGTC 742896
Query 33153 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT 33212
| |||| | |||||| ||||||||||| || | || ||| || | || | |
Sbjct 742895 AACATATTGATACATCATATCACAATTCATACCCAAGAGAGAAACAGGTAATGCATCTCT 742836
Query 33213 A-AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCAC 33271
||||| |||| |||||| || || || || || || | | | ||| | |
Sbjct 742835 CCAGAAAGTCTT-TTCAATATCCACAGCTTCAGTCATGATCTTGGTGATGATTTTCTTAT 742777
Query 33272 TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 33331
| || || || ||||| || | | || ||||||||| || | ||| ||||
Sbjct 742776 TAGGAGGGTGTTTCAAATGAGAGAATAATAGGCAGGCGAAATCGGTATGTAAACCTTCGT 742717
Query 33332 CTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 33391
|||| | || |||||||| || || || || || ||||| | || | ||| || ||||
Sbjct 742716 CTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGCATCAAACCTCTCTTCTTTAGCC 742657
Query 33392 AAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAA 33451
|||| |||| || ||||| || || ||||||| ||||| | || || ||||| | |
Sbjct 742656 AAAAGATGGCCGCAAATGAACCGGAGAAGAAGACACCTTCGATAGCGGCGAAGGCGACCA 742597
Query 33452 GTCTCTCTCCATAACCGGC------GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 33505
||| ||| | || || ||||| || ||||| ||||||| ||||
Sbjct 742596 ATCTTTCTGCGTATAGTGCATCCTTGCTGT--TG-ATCCAACGAAGAGCCCATAATGCCT 742540
Query 33506 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 33565
| | || | || || ||||| ||||||||||| | || | ||| || |||
Sbjct 742539 TTTCCTTAATTGGGGGAATAGTTTCAATGGCATTAAATAAGTAATCAGATTCCTTCTTAT 742480
Query 33566 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 33625
|| | || || || || | ||| ||| ||| | || ||||| ||||| || | |
Sbjct 742479 CTGTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCTCAGAATGGATGTTCTCCACCATGA 742420
Query 33626 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC-TTCTGTACAAAATCGTTCC 33684
|||| ||||||||||| |||||||| | | ||| || |||||| || | ||
Sbjct 742419 TCTGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCTGAACGTTCTGTGTGAAGT-TTTGA 742361
Query 33685 GCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33744
|||||| |||| || || || ||| ||| ||||| || ||||| ||| || ||
Sbjct 742360 ATCAAATTCTCATCAACGATACCATCAGAGGCGGCAAAGAAGGCCAACACACGTGCGATG 742301
Query 33745 AAATATTTTTCGTCTGGTGTTA----GTTTATTCCAATCATTGATATCTTTAGATATATC 33800
|||||| |||| | ||| ||| || ||||| ||| | ||| || || | |||
Sbjct 742300 AAATATCTTTCAT-TGGCATTAAGCTTGTTCTTCCAGTCAGGAACATCCTTTGAGAGATC 742242
Query 33801 TACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATA 33860
| |||||| | ||||| || ||||| || ||||| || ||||| | ||| || ||||
Sbjct 742241 GATCTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACATCTGCCAAATATCATC 742182
Query 33861 ATATTGGATTGGGAAAATAACAAATCTAT 33889
|||||||| ||||| || ||||||||||
Sbjct 742181 GTATTGGATAGGGAACATGACAAATCTAT 742153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946608200160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |