Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq45 116 3e-21
seq15 113 4e-20
seq1 95.1 1e-14
>seq45
Length=579175
Score = 116 bits (128), Expect = 3e-21
Identities = 174/246 (71%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 23972 TACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTAC 24031
|||||||| | | | ||||||||| | || || || || || || || || | |||||
Sbjct 355126 TACTTTTT--CAATAGAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTAC 355069
Query 24032 CATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGA 24091
| | ||||||||| | || ||||| || | ||||| || |||||| || || ||
Sbjct 355068 CTTGGAAGTCGAGTCTTCTGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGA 355009
Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151
|| || || || ||||| |||||| |||| | | || |||||| | || || | |||
Sbjct 355008 GGGAATCCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAG 354949
Query 24152 AAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAG 24211
|| | ||| || ||||||||||| ||||| ||| | || || || | ||||||||
Sbjct 354948 AACTTTGTCCGACTACAACATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAG 354889
Query 24212 AGGAGG 24217
||| ||
Sbjct 354888 AGGTGG 354883
>seq15
Length=115448
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || ||||| ||||| || | || ||| | ||||||||| |
Sbjct 17 ATGCAGATTTTCGTCAAGACATTGACTGGTAAGACCATCACCTTGGAAGTCGAGTCTTCT 76
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | || ||||||||||| || |||||||| || ||||| |||||
Sbjct 77 GATACGATCGATAATGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 136
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|||||| |||| | | ||| ||||| | ||||||| |||| | || || ||
Sbjct 137 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 196
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || || || ||||| |||| || || || ||||||||||| ||
Sbjct 197 ATCCAGAAGGAGTCTACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 243
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || |||||||| || ||| | || ||| | |||||||| |
Sbjct 245 ATGCAGATTTTCGTCAAGACATTAACAGGCAAAACCATCACCTTGGAAGTCGAATCTTCA 304
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || ||||||||||| || |||||||| || ||||| |||||
Sbjct 305 GACACGATCGATAACGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 364
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|||||| |||| | | ||| ||||| | ||||||| |||| | || || ||
Sbjct 365 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 424
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || || || ||||| |||| || || || || ||||| || ||
Sbjct 425 ATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGGTTGAGGGGTGG 471
>seq1
Length=1746572
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| |||||| | || || || || || || || || | |||||| | || || ||| |
Sbjct 814062 CAATATGCAAATTTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTC 814003
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||||| || || | ||||| || ||||| ||||| || || || || || ||
Sbjct 814002 TTCTGACACTATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGAATTCCACCTGA 813943
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGAT 24164
||| |||||| |||| | | || ||||| | || |||| ||||| ||||| |
Sbjct 813942 TCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACATTGTCAG--AC 813885
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| || || ||||| || | || ||||| || ||||||||||| ||
Sbjct 813884 TACAACATCCAGAAGGAATCCACCTTGCACTTAGTCTTGAGATTGAGAGGTGG 813832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935601771780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |