Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq45 107 2e-18
seq15 86.0 6e-12
>seq45
Length=579175
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || || || || | || || ||||||||||||||||| ||| |
Sbjct 354883 CCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGAC 354942
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | |||||| | ||||| || || |||| || | |||||| || || |||
Sbjct 354943 AAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 355002
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || || || || |||||||||| | || | ||||| | |||||||
Sbjct 355003 ATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACT 355062
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||| ||||| || | || || |||||||| |||||
Sbjct 355063 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 355109
>seq15
Length=115448
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || || || || | || |||||||| || || ||||| ||
Sbjct 243 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 184
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | || |||| |||||| || || |||| || | |||||| || |||||
Sbjct 183 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 124
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| |||||||| || ||| || || || | | || | ||||| | |||||||
Sbjct 123 ATACCTTCTTTATCTTGGATCTTTTGTTTCACATTATCGATCGTATCAGAAGACTCGACT 64
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| ||||| || | || || ||||||||||||||
Sbjct 63 TCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTGCAT 17
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012351587840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |