Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq45 96.9 3e-15
seq1 86.0 5e-12
>seq45
Length=579175
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|| || |||| |||| || || |||||||| ||||||||||||| || ||| || ||
Sbjct 354895 CTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCCG 354954
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
||||||||||| || || ||| | || | | ||| || || || | ||||| ||
Sbjct 354955 TCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTA 355014
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||| | |||||| || | | | | || || | ||| ||||| ||| |||
Sbjct 355015 TCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACTTCCAAGGTAATG 355074
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941
|| || || |||| || || || ||||| |||||||| ||
Sbjct 355075 GTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTCTA 355115
>seq1
Length=1746572
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|||| ||||| ||||| || ||||||||||| | || ||| || | |||||||| ||
Sbjct 813856 TGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTTCTGCCATCCTCCAACTGC 813915
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| | || | | ||| || || || | ||||| ||||| || | |
Sbjct 813916 TTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTC 813975
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||||| || | | | | |||||| | ||| |||| ||| ||||| || ||||||
Sbjct 813976 TGCTTGACATTGTCAATAGTGTCAGAAGACTCAACCTCCAAGGTAATGGTCTTACCGGTC 814035
Query 16913 AGCGTTTTGACAAAAATCTGCATTTTG 16939
| || || || ||||| ||||| |||
Sbjct 814036 AAGGTCTTAACGAAAATTTGCATATTG 814062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087624787240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |