Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq45 96.9 3e-15 seq1 86.0 5e-12 >seq45 Length=579175 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| || || |||||||| ||||||||||||| || ||| || || Sbjct 354895 CTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCCG 354954 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||||||||| || || ||| | || | | ||| || || || | ||||| || Sbjct 354955 TCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTA 355014 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | |||||| || | | | | || || | ||| ||||| ||| ||| Sbjct 355015 TCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACTTCCAAGGTAATG 355074 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941 || || || |||| || || || ||||| |||||||| || Sbjct 355075 GTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTCTA 355115 >seq1 Length=1746572 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||| ||||| ||||| || ||||||||||| | || ||| || | |||||||| || Sbjct 813856 TGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTTCTGCCATCCTCCAACTGC 813915 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | || | | ||| || || || | ||||| ||||| || | | Sbjct 813916 TTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTC 813975 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | | |||||| | ||| |||| ||| ||||| || |||||| Sbjct 813976 TGCTTGACATTGTCAATAGTGTCAGAAGACTCAACCTCCAAGGTAATGGTCTTACCGGTC 814035 Query 16913 AGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || || ||||| ||||| ||| Sbjct 814036 AAGGTCTTAACGAAAATTTGCATATTG 814062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087624787240