Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq12 282 5e-71
seq23 226 4e-54
>seq12
Length=1129233
Score = 282 bits (312), Expect = 5e-71
Identities = 754/1143 (66%), Gaps = 22/1143 (2%)
Strand=Plus/Minus
Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882
|||||||||| || || || ||||| ||||||||| ||||||| |||||||| || || |
Sbjct 52962 ACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCA 52903
Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 62941
||||||||||||| |||||| |||| | ||| | |||| | ||| | | || |||||
Sbjct 52902 TGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCT-GAGCC 52844
Query 62942 TTTATTATAGATTTGTATCTCTTTTCTC--TTTCGTATAGTGTATACAATCGTTCGAACT 62999
|| | || | | | | | | ||| | ||||| | || || || || ||||
Sbjct 52843 TTGACGGTACGTCT--ACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACT 52786
Query 63000 CGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059
||||||| | || | || || ||| ||| || | | | | ||| | |
Sbjct 52785 CGTCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGAC 52726
Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119
||| | || || || ||||| || | || |||||||| || ||| || | ||| |
Sbjct 52725 CGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCAC 52666
Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179
|| | |||||| || || ||||||| | | ||| | ||| | | || || |
Sbjct 52665 GGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTG 52606
Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239
||||| ||||||| || | || || | || || | |||||| ||||| || || |
Sbjct 52605 CGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTGTTACCTCCTTGGTCGA 52546
Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299
|||||| || ||||| || |||| | | |||||||||||||||||| || ||||| |
Sbjct 52545 CGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCGT 52486
Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359
|||| || | ||| || ||| ||||||||| || ||| | ||| || || |
Sbjct 52485 TGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATACCGC 52426
Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419
| || | || || || || || || ||| || ||||| |||||||| || ||| ||
Sbjct 52425 CGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAGAAT 52366
Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479
| ||| |||| || | ||| ||| |||||| || || | || |||||||| |
Sbjct 52365 CGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCATTGA 52306
Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539
| || || ||||||||||| || || | || || | ||| || || ||||| |
Sbjct 52305 ACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTC----G 52250
Query 63540 CTGAGTCT----ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63595
||| ||| ||||| ||||||||| || || || | ||| | || || ||
Sbjct 52249 ATGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGT 52190
Query 63596 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63655
||||| || | | || || ||| |||| | ||||| ||||| ||||| |||
Sbjct 52189 GGTCTCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAA 52130
Query 63656 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA 63715
||||| |||||||| ||||| || |||||| |||| | ||||| | | ||| ||
Sbjct 52129 CCAAAGTAGTTGTAGTTGAAGTCACGGTCGTAATTAATGGCAGAGTTCAACTCATCTTTG 52070
Query 63716 TATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTA 63775
| | | | ||| || ||||| || | |||||| | ||| ||||
Sbjct 52069 TGTCTCATCACTGTGTCATAGGTAAGTTGCGAGACCATAGGACATGCCTTCTTGGTTTTC 52010
Query 63776 GGATTGACATAGT---TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCT 63832
||||| ||||| || | | |||| | || || || ||||| ||||| |
Sbjct 52009 GGATT---ATAGTAACTGTAGAGCTCCTGGACAACATCCGAGAAGAGTTTCTTTGTCTGC 51953
Query 63833 TTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTA 63892
||||| | ||| || | ||| | ||| ||||| | |||||||||||| ||||| |||
Sbjct 51952 TTGTGCAAATTCGAAATGGCGAGTCTGGCGGCCAAAATGGCATAATCAGGATGGATCGTA 51893
Query 63893 GTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATT 63951
|| || || || || | || |||| || | | || ||||| || || || || || |
Sbjct 51892 GT-CATGTACGCAGCGGTCTCAGCTGTCAAATTATCTAATTCAACTGTGGTAACCCCCTC 51834
Query 63952 ATA 63954
|||
Sbjct 51833 ATA 51831
Score = 140 bits (154), Expect = 4e-28
Identities = 598/928 (64%), Gaps = 43/928 (5%)
Strand=Plus/Plus
Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482
||||| |||| | || ||||| ||||| ||| ||| || || | || || ||
Sbjct 997091 GATCCCTCATAGCTTTCATATGGCCCTTCTTTCATAGCAAGCTCCATAGATGCTTCCAAG 997150
Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542
|| || | ||| ||||||| |||||||| | ||| || | | ||| | || ||
Sbjct 997151 GCCCCATGATAGATGGTTTGGAAGATCTCCAAATTGAGTCGTCTGGATTCTCGACTTCCA 997210
Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602
|| || | || | || |||||| ||||| | ||| ||||| |||| | | || ||
Sbjct 997211 AACGGTAACTTCATTTCAAAAAACGCATCTGCAAGTCCCTGAACTCCAACAGCAATTGGC 997270
Query 62603 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62662
|| || || ||||||||| ||| |||| | |||||| | |||||| |
Sbjct 997271 CTGTGCTTCATATTAGAGACCTCACATTCTTTCAGAGGATATGCTCCGACATCTATGACC 997330
Query 62663 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-- 62720
||||||||| |||| |||||| |||| | ||||| | | || ||||
Sbjct 997331 CGATTGAGATTATGAACAAGAACTTTGGTCACAGAATGGAGTTTCCGGAGATTAAATGTT 997390
Query 62721 GCCCATCTATTACAA---------ACAT-----GTTCAATGCAACAGATGCCAGATTACA 62766
| || || || || | |||| | | ||| | | || |||| ||||||
Sbjct 997391 GGCCGTCCATCACTAGCCCTCTCAACATAACTAGGT-AATCCTAACGAGGCCAAATTACA 997449
Query 62767 AACGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACAC 62824
||||| | |||| | || | ||||| | | |||| ||||||||| |
Sbjct 997450 TACGGCAATTTCATC--CTTCGATGAATATTCAACAACCTCACAGCAAAGATTCGAGGAT 997507
Query 62825 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 62884
||||||||||| || || ||||| || ||| ||| || |||||||||||||| | |
Sbjct 997508 TTGATGGTTCCCAAGTTCTGTTGGTTCGACTTGGAGTTGCAGGCATCCTTATAAAGCAAG 997567
Query 62885 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 62944
|| ||||| || |||||| |||| || || ||| | ||| || |||||| |
Sbjct 997568 AAAGGAGTTCCTGTTTCAGTCTGTGAAATTAGGATCTTCTCCCACACTTTACGAGCCCTC 997627
Query 62945 A--TTATAGATTTGT-ATCTCTTTTCTCT-TTCGTATAGTGTA-TACAATCGTTCGAACT 62999
| | | || | ||| | | | ||| ||| || | || | | |||| ||
Sbjct 997628 ACCTGACGAATATAAGATCCC----CGCGATTCATATT-TGCAGTAGAGTTGTTCAAAGG 997682
Query 63000 CGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCATCCGGACACATCAACGACCACT 63056
| ||||||| || ||| | ||||||||| |||| | | || ||||
Sbjct 997683 ATTTTCCCCAA-CA--GTCAGATAATCCAGGACAGGTATCCTCCGAAAACAGGCTCCACA 997739
Query 63057 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGA 63115
|| | || | | ||| |||||||| || | ||| || ||||||||||| ||| |||||
Sbjct 997740 CTTCATCGTTTTCCACACGTTTCATGAACAAATCTGGGATCCAAAGAGC-ATAGAATAGG 997798
Query 63116 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63175
|| |||| || || || || || |||||||| | || | ||| |||| |||
Sbjct 997799 TCCCTGGCCCTCATCTCTTCCTTACCGTGGTTCTTTTTCAAGTCTAAGAATTCCATGATA 997858
Query 63176 TCAGAATGCCACGGTTCCAAGTATATGGCC--ATAACTCCAGGCCGTTTGTTTCCTCCCT 63233
|| | |||||||||||| | ||| | | ||| | ||||| ||||| || || ||||
Sbjct 997859 TCCGCATGCCACGGTTCTA--GATAGGCACAGATAGCACCAGGTCGTTTATTACCACCCT 997916
Query 63234 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 63293
| || | ||| |||||| | || | |||| || ||| || | ||| ||| | |||
Sbjct 997917 GGTCAACATATTGAGCGGTACTGTTGAAGACTCGCAGCATAGGCACAATTCCACTTGATT 997976
Query 63294 TACCATTGGTCCCTGAGATATAGCTTCC 63321
|||||||| || || |||||| ||||
Sbjct 997977 CTCCATTGGTACCCGATATATAGGTTCC 998004
>seq23
Length=838141
Score = 226 bits (250), Expect = 4e-54
Identities = 586/877 (67%), Gaps = 36/877 (4%)
Strand=Plus/Minus
Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450
|||||||| || || || || || | ||||| || |||||||||||||||||||||||
Sbjct 743014 TTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTTTCCATGAAATCGAATGGATTT 742955
Query 32451 GTAACATTATAAAtttttttAAATCCCAATTC-AGAAATCAATCTATCTGCGACA-AATT 32508
||| | || || | ||| | | || | || || |||||| || || ||| || |
Sbjct 742954 GTAGCGTTGTAGACTTTGTCGCAGCCTAGGGAGAGTAA-CAATCTGTCGGC-ACAGAAGT 742897
Query 32509 CTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAG 32568
| | |||| | |||||| ||||||||||| || | || ||| || | || |
Sbjct 742896 CAACATATTGATACATCATATCACAATTCATACCCAAGAGAGAAACAGGTAATGCATCTC 742837
Query 32569 TA-AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTG-----TTT 32622
| ||||| |||| ||||||| || || || || || |||||| || |||
Sbjct 742836 TCCAGAAAGTCTT-TTCAATATCCACAGCTTCAGTCAT----GATCTTGGTGATGATTTT 742782
Query 32623 CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGAC 32682
||| | | || || | ||||| || | | || ||||||||| |||| ||
Sbjct 742781 CTT-ATTAGGAGGGTGTTTCAAATGAGAGAATAATAGGCAGGCGAAATCGGTATGTAAAC 742723
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
| |||||||| | || | |||||| || || || || || ||||| | || | ||| |
Sbjct 742722 CTTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGCATCAAACCTCTCTTCT 742663
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| |||||||| |||| ||||||||| || || ||||| | ||||| | || || ||||
Sbjct 742662 TTAGCCAAAAGATGGCCGCAAATGAACCGGAGAAGAAGACACCTTCGATAGCGGCGAAGG 742603
Query 32803 CAATAAGTCTCTCTCCATAACCGGC------GCTGTCATGTATCCACTTTTGAGCCCAAT 32856
| | | ||| ||| | || || ||||| || ||||| |||||||
Sbjct 742602 CGACCAATCTTTCTGCGTATAGTGCATCCTTGCTGT--TG-ATCCAACGAAGAGCCCATA 742546
Query 32857 CGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCAT 32916
||||| | || | || || || || || |||||||| | || | ||| |
Sbjct 742545 ATGCCTTTTCCTTAATTGGGGGAATAGTTTCAATGGCATTAAATAAGTAATCAGATTCCT 742486
Query 32917 TACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAA 32976
| ||||| | || || || |||| ||| ||| ||| | || ||||| ||||| || |
Sbjct 742485 TCTTATCTGTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCTCAGAATGGATGTTCTCCA 742426
Query 32977 TGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC-TTCTGTACAAAAT 33035
|| || |||||||||||| |||||||| | | ||| || |||||| ||
Sbjct 742425 CCATGATCTGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCTGAACGTTCTGTGTGAA-- 742368
Query 33036 CGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 33093
||| || ||||| |||| || || || ||| ||| ||||| || ||||| |||
Sbjct 742367 -GTTTTGAATCAAATTCTCATCAACGATACCATCAGAGGCGGCAAAGAAGGCCAACACAC 742309
Query 33094 GTTTTATAAAATATTTTTCGTCTGGTGTTA----GTTTATTCCAATCATTGATATCTTTA 33149
|| || |||||| |||| | ||| ||| || ||||| ||| | ||| ||
Sbjct 742308 GTGCGATGAAATATCTTTCAT-TGGCATTAAGCTTGTTCTTCCAGTCAGGAACATCCTTT 742250
Query 33150 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 33209
|| | ||| | |||||| | ||||| || ||||| || ||||| || ||||| | |||
Sbjct 742249 GAGAGATCGATCTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACATCTGCCAA 742190
Query 33210 ATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 33246
|| |||| ||||| || || || || ||||||||||
Sbjct 742189 ATATCATCGTATTGGATAGGGAACATGACAAATCTAT 742153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631398049600
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