Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq23 223 4e-53 >seq23 Length=838141 Score = 223 bits (246), Expect = 4e-53 Identities = 524/784 (67%), Gaps = 13/784 (2%) Strand=Plus/Minus Query 92918 AATAATCTATCAGCTACA-AATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 || ||||| || || ||| || || | || ||| |||||| |||||||||||| || | Sbjct 742918 AACAATCTGTCGGC-ACAGAAGTCAACATATTGATACATCATATCACAATTCATACCCAA 742860 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACGGCTTCTTTCA 93035 ||| ||||||| || || || ||||| ||||| || || | || ||||| ||| Sbjct 742859 GAGAGAAACAGGTAATGCATCTCTCCAGAAAGTCTTT-TCAATATCCACAGCTTCAGTCA 742801 Query 93036 AGATTTCT---ATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGC 93092 ||| | || | | | |||| || || | || | || | | | | || || Sbjct 742800 TGATCTTGGTGATGATTTTCTTATTAGGAGGGTGTTTCAA---ATGAGAGAATAATAGGC 742744 Query 93093 ACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAAC 93152 | || || |||||||||||||||||||||| | || | || || ||| || | || Sbjct 742743 AGGCGAAATCGGTATGTAAACCTTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGAC 742684 Query 93153 CTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTA 93212 |||| | || |||| ||||| |||||||| || | ||||| ||| || || || | Sbjct 742683 CTGGCATCAAACCTCTCTTCTTTAGCCAAAAGATGGCCGCAAATGAACCGGAGAAGAAGA 742624 Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA 93272 |||||| | || || || || || | | ||| || | ||| || ||| ||| Sbjct 742623 CACCTTCGATAGCGGCGAAGGCGACCAATCTTTCTGCGTATAGTGCATCCTTGCTGTTGA 742564 Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332 |||| | |||||| || |||| |||||| || | ||||| || || |||| Sbjct 742563 TCCAACGAAGAGCCCATAATGCCTTTTCCTTAATTGGGGGAATAGTTTCAATGGCATTAA 742504 Query 93333 ATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTT 93392 ||| |||||| || | | |||| | ||| || || | || |||||||| | | Sbjct 742503 ATAAGTAATCAGATTCCTTCTTATCTGTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCT 742444 Query 93393 CAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCT 93452 ||||||||| ||||||| || |||||||||||||| ||||| || | | || Sbjct 742443 CAGAATGGATGTTCTCCACCATGATCTGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCT 742384 Query 93453 GCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaa 93512 | || | || | || | | | | ||| |||| || |||||||| || || |||| Sbjct 742383 GAACGTTCTGTGTGAAGTTTTGAATCAAATTCTCATCAACGATACCATCAGAGGCGGCAA 742324 Query 93513 aaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAAT 93569 | || ||||| | | | || |||| | | |||| | |||||| || | ||| | Sbjct 742323 AGAAGGCCAACACACGTGCGATGAAATATCTTTCATTGGCATTAAGCTTGTTCTTCCAGT 742264 Query 93570 CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTT 93629 | | | ||| ||||| ||||||| ||||| ||||||| || |||||||| || || | Sbjct 742263 CAGGAACATCCTTTGAGAGATCGATCTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCT 742204 Query 93630 TGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTAT 93689 ||||||| | ||| || || | ||||| || || || |||||||| | || ||| | Sbjct 742203 TGTACATCTGCCAAATATCATCGTATTGGATAGGGAACATGACAAATCTATGCTTGTTCT 742144 Query 93690 CTTT 93693 |||| Sbjct 742143 CTTT 742140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860270982240