Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq45 129 5e-25 >seq1 Length=1746572 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| ||||| || || |||||||| || | || | || || || | Sbjct 814061 AATATGCAAATTTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCT 814002 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || || || |||||||||||||| |||||||| ||| Sbjct 814001 TCTGACACTATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGAATTCCACCTGAT 813942 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | | || ||||| || || ||||| |||||| | | || | || || ||| Sbjct 813941 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACATTGTCAGACTAC 813882 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||||||| | || ||||| ||| ||||| | || ||| Sbjct 813881 AACATCCAGAAGGAATCCACCTTGCACTTAGTCTTGAGATTGAGAGGTGGT 813831 >seq45 Length=579175 Score = 129 bits (142), Expect = 5e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| ||||| || || || ||||| || | || | ||||| || | Sbjct 355112 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTCT 355053 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | ||| || |||| || || |||||||| |||||||| || ||||| ||| Sbjct 355052 TCTGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGGAATCCCACCAGAT 354993 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | | || ||||| || || || || ||||| | | || | ||||| ||| Sbjct 354992 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAACTTTGTCCGACTAC 354933 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 ||||||||||| ||||| || | || || ||| | ||||| | || ||| || Sbjct 354932 AACATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAGAGGTGGTATT 354879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727611226940