Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq23 132 1e-25
>seq23
Length=838141
Score = 132 bits (146), Expect = 1e-25
Identities = 387/593 (65%), Gaps = 6/593 (1%)
Strand=Plus/Plus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
||||| || |||||||||| || || | ||| | |||| ||||| ||||||
Sbjct 496214 GACTTTATAAACAAGGAGCTTATCCTATACTCAATGGCTGATAATATTCGTTCGATTCCC 496273
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637
|| ||||| || |||||||||||||| | |||||||| | || | ||| ||
Sbjct 496274 TCTGTTGTGGACGGTTTCAAGCCATCGCAGAGGAAGATCCTATATGGTTGCTACAAACGT 496333
Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697
||| || |||||| || || ||||||| |||||| | | || | ||||
Sbjct 496334 AACTTGAGGGGAGAAATCAAAGTGTCTCAGTTGGAAGGTTATATCGCTGAGCATACTGGT 496393
Query 218698 TACCATCACGGTGA-GCAGAGTC--TGCAGGGTGCCATTGTAGGCATGGCACAGGACTAT 218754
|| ||||| || || ||| | | ||| | ||||| | || || || | |
Sbjct 496394 TATCATCATGGAGATGCATCTTTGATCCAGA---CAATTGTGTCGTTAGCTCAAGATTTT 496450
Query 218755 GTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTG 218814
|| || |||||| ||||| | || |||| | ||| ||||||||| |
Sbjct 496451 GTTGGATCTAACAATCTGAACCTTCTTTTCCCACATGGTGGATTTGGTTCTAGAGCTGCC 496510
Query 218815 GGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGC 218874
||||| |||||| |||| |||| || ||||| ||||| | | || || | ||| |
Sbjct 496511 GGTGGTAAGGATGCTGCTGCTGCAAGATATATTTTTACTGAACTCTCCGCCATCACGAGA 496570
Query 218875 CAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCG 218934
|||||||||||| |||| || || || || ||||| | || |||| |
Sbjct 496571 AAGGTGTTCAATCCACTCGATAATAATCTTCTCAAATATCTGAAAGATGATGAACAGACC 496630
Query 218935 ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGT 218994
|||| || || |||||||| || | ||||| | |||| ||||||||||| | ||
Sbjct 496631 GTTGAACCTGAATGGTATGTTCCAGTGATTCCAATGGTGCTTGTAAATGGTGCGGAGGGA 496690
Query 218995 ATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAAC 219054
||||| | || | |||||| ||||| |||||||| || | || || | || |||
Sbjct 496691 ATCGGTTCGGGATGGAGTACTTCGATTCCCTCTTACAACCCGGAAGAGATTGTGGAAAAC 496750
Query 219055 GTCAAGCGTCTCATATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGTACAA 219107
| |||| || || |||| ||||||| || |||| || ||||| ||
Sbjct 496751 ATTCAGCGCCTGATGCGTGGCGAGGAGATTTTAGAGATGATCCCCTGGTATAA 496803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835799143916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |