Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq23 132 1e-25 >seq23 Length=838141 Score = 132 bits (146), Expect = 1e-25 Identities = 387/593 (65%), Gaps = 6/593 (1%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 ||||| || |||||||||| || || | ||| | |||| ||||| |||||| Sbjct 496214 GACTTTATAAACAAGGAGCTTATCCTATACTCAATGGCTGATAATATTCGTTCGATTCCC 496273 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 || ||||| || |||||||||||||| | |||||||| | || | ||| || Sbjct 496274 TCTGTTGTGGACGGTTTCAAGCCATCGCAGAGGAAGATCCTATATGGTTGCTACAAACGT 496333 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 ||| || |||||| || || ||||||| |||||| | | || | |||| Sbjct 496334 AACTTGAGGGGAGAAATCAAAGTGTCTCAGTTGGAAGGTTATATCGCTGAGCATACTGGT 496393 Query 218698 TACCATCACGGTGA-GCAGAGTC--TGCAGGGTGCCATTGTAGGCATGGCACAGGACTAT 218754 || ||||| || || ||| | | ||| | ||||| | || || || | | Sbjct 496394 TATCATCATGGAGATGCATCTTTGATCCAGA---CAATTGTGTCGTTAGCTCAAGATTTT 496450 Query 218755 GTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTG 218814 || || |||||| ||||| | || |||| | ||| ||||||||| | Sbjct 496451 GTTGGATCTAACAATCTGAACCTTCTTTTCCCACATGGTGGATTTGGTTCTAGAGCTGCC 496510 Query 218815 GGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGC 218874 ||||| |||||| |||| |||| || ||||| ||||| | | || || | ||| | Sbjct 496511 GGTGGTAAGGATGCTGCTGCTGCAAGATATATTTTTACTGAACTCTCCGCCATCACGAGA 496570 Query 218875 CAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCG 218934 |||||||||||| |||| || || || || ||||| | || |||| | Sbjct 496571 AAGGTGTTCAATCCACTCGATAATAATCTTCTCAAATATCTGAAAGATGATGAACAGACC 496630 Query 218935 ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGT 218994 |||| || || |||||||| || | ||||| | |||| ||||||||||| | || Sbjct 496631 GTTGAACCTGAATGGTATGTTCCAGTGATTCCAATGGTGCTTGTAAATGGTGCGGAGGGA 496690 Query 218995 ATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAAC 219054 ||||| | || | |||||| ||||| |||||||| || | || || | || ||| Sbjct 496691 ATCGGTTCGGGATGGAGTACTTCGATTCCCTCTTACAACCCGGAAGAGATTGTGGAAAAC 496750 Query 219055 GTCAAGCGTCTCATATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGTACAA 219107 | |||| || || |||| ||||||| || |||| || ||||| || Sbjct 496751 ATTCAGCGCCTGATGCGTGGCGAGGAGATTTTAGAGATGATCCCCTGGTATAA 496803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835799143916