Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq15 96.9 3e-15
seq45 87.8 2e-12
>seq15
Length=115448
Score = 96.9 bits (106), Expect = 3e-15
Identities = 166/240 (69%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 114143 CCATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAAT 114202
|| |||||| |||| || | | ||||| || || || | ||||| || || || ||
Sbjct 482 CCCTTTACA--TACCACCCCTCAACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGAT 425
Query 114203 GTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTG 114262
||||| || | || | | |||||| | || ||||| || |||| | | |||
Sbjct 424 ATTGTAGTCAGAAAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTG 365
Query 114263 TTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322
|| || |||||||| |||||||| || ||||||||||| | | || | |||||
Sbjct 364 CTGATCAGGAGGAATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTC 305
Query 114323 GGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| |||||||| |||| ||| | |||||||| || | || || || |||||||||||
Sbjct 304 TGAAGATTCGACTTCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||||||| || || | ||||| || || || || ||||| ||
Sbjct 246 ATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCA 187
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | | |||||| | || ||||| || |||| | | ||| || || |||
Sbjct 186 GAAAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGA 127
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| |||||||| || ||||||||||| | | || | || || | || |||
Sbjct 126 GGAATACCTTCTTTATCTTGGATCTTTTGTTTCACATTATCGATCGTATCAGAAGACTCG 67
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || || |||| || || || |||||||||||
Sbjct 66 ACTTCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTGCAT 17
>seq45
Length=579175
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211
|||||| || | | ||| | ||| || || | || ||||| |||||||||||||| ||
Sbjct 354879 AATACCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTC 354938
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
| || ||| | || || | ||| |||||||| |||| | | ||| || || ||
Sbjct 354939 GGACAAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGG 354998
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
|| || || || || || |||||| || || | | |||| ||| || | || ||
Sbjct 354999 TGGGATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTC 355058
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| |||| ||| | || || || |||| || || || ||||| |||||
Sbjct 355059 GACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 355109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134010850512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |