Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq23 114 2e-20 >seq23 Length=838141 Score = 114 bits (126), Expect = 2e-20 Identities = 180/255 (71%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 || || ||||| || || || ||| || ||| | ||||| ||||| || ||| Sbjct 742503 TTTAATGCCATTGAAACTATTCCCCCAATTAAGGAAAAGGCATTATGGGCTCTTCGTTGG 742562 Query 42672 ATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGC 42731 ||| | || || ||| | || || || |||| ||||| |||| |||| || Sbjct 742563 ATCAACAGCAAGGATGCACTATACGCAGAAAGATTGGTCGCCTTCGCCGCTATCGAAGGT 742622 Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCC 42790 |||||||||| || | || || ||||||| ||||| ||| ||| |||| | |||||| Sbjct 742623 GTCTTCTTCTCCGGTTCATTTGCGGCCATCTTTTGGCTAAAGAAGAGAGGTTT-GATGCC 742681 Query 42791 CGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGC 42850 || || ||||||||||||||||| ||| |||| ||||| || | |||| || || || Sbjct 742682 AGGTCTTACCTTCTCGAACGAACTTATCTGCAGAGACGAAGGTTTACATACCGATTTCGC 742741 Query 42851 CTGCCTCCTGTTCTC 42865 |||||| | ||||| Sbjct 742742 CTGCCTATTATTCTC 742756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338302877760