Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq16 109 5e-19 >seq16 Length=109755 Score = 109 bits (120), Expect = 5e-19 Identities = 317/479 (66%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 20281 GGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGA 20340 |||||||||||| ||||| || | |||||| || | ||| ||||| |||| ||| || Sbjct 15057 GGCAATGTTAAAGGGAACACCAAGACCCATATCGCACGATCTCTGGTACATCTGGCAATT 14998 Query 20341 -AAGCTCACC--GTC--------AGCT-ACATAAAATTGACATAACAAGTGACAGGGCGG 20388 || ||| | ||| |||| || || || || || || | |||||| || || Sbjct 14997 CAACCTCGGCTTGTCCGATTTAAAGCTGACGTAGAACTGGCAGAAGACGTGACACGGAGG 14938 Query 20389 AAGCGCCAT--CAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCG 20446 || ||||| | || ||| | | || ||||| || | | ||||||||||||||| Sbjct 14937 TAGTGCCATTTCTTTGA-AAG-CGGGAGGATTCCAAGCTGATAGTATGATTCTTCTATCG 14880 Query 20447 TGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTA 20506 | ||||| | |||| || | |||| | | ||| ||||| || || || ||| Sbjct 14879 TAAGGATTGGTCTTTAGAGTATGAATAATGGTAGCGATTTGATCAAATCCTTGTCCGGTA 14820 Query 20507 TAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACA 20566 ||||| | ||| || || ||| || || || || ||||| ||||| ||||| | | Sbjct 14819 TAGTCGGTATCACAATCGACATACTTAGCACCGAAATGTCTCCATTGGAATCCGTAGATA 14760 Query 20567 GGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAG 20626 || |||||||| |||| | ||| | || || | ||| | | |||| || Sbjct 14759 GGACCCAAATCATCCTCTCGTCTACTCTTGAGTCCTAGGGAATCCAAGTATTCCCGCGAT 14700 Query 20627 CCATTTTTGTCCCATATCTTGACTCCTGTTCT-TGAAAGCTCCCTGGAGTCAGTACTCCC 20685 ||||| ||||| || | || ||| |||| ||| |||| | | ||| |||||||| Sbjct 14699 CCATTACCTTCCCAGATATGAACGCCT-TTCTCTGAGAGCTTCTTACCGTCCGTACTCCC 14641 Query 20686 CTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTA 20744 | ||||| || | || || | | ||||| |||| || ||||||||||||| Sbjct 14640 TGATATGAACCATAGTAATTCGTGGAGGATGCCTCTGAAAAAGACACGCTTTGTGGTTA 14582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372380695840