Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq16 109 5e-19
>seq16
Length=109755
Score = 109 bits (120), Expect = 5e-19
Identities = 317/479 (66%), Gaps = 18/479 (4%)
Strand=Plus/Minus
Query 20281 GGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGA 20340
|||||||||||| ||||| || | |||||| || | ||| ||||| |||| ||| ||
Sbjct 15057 GGCAATGTTAAAGGGAACACCAAGACCCATATCGCACGATCTCTGGTACATCTGGCAATT 14998
Query 20341 -AAGCTCACC--GTC--------AGCT-ACATAAAATTGACATAACAAGTGACAGGGCGG 20388
|| ||| | ||| |||| || || || || || || | |||||| || ||
Sbjct 14997 CAACCTCGGCTTGTCCGATTTAAAGCTGACGTAGAACTGGCAGAAGACGTGACACGGAGG 14938
Query 20389 AAGCGCCAT--CAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCG 20446
|| ||||| | || ||| | | || ||||| || | | |||||||||||||||
Sbjct 14937 TAGTGCCATTTCTTTGA-AAG-CGGGAGGATTCCAAGCTGATAGTATGATTCTTCTATCG 14880
Query 20447 TGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTA 20506
| ||||| | |||| || | |||| | | ||| ||||| || || || |||
Sbjct 14879 TAAGGATTGGTCTTTAGAGTATGAATAATGGTAGCGATTTGATCAAATCCTTGTCCGGTA 14820
Query 20507 TAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACA 20566
||||| | ||| || || ||| || || || || ||||| ||||| ||||| | |
Sbjct 14819 TAGTCGGTATCACAATCGACATACTTAGCACCGAAATGTCTCCATTGGAATCCGTAGATA 14760
Query 20567 GGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAG 20626
|| |||||||| |||| | ||| | || || | ||| | | |||| ||
Sbjct 14759 GGACCCAAATCATCCTCTCGTCTACTCTTGAGTCCTAGGGAATCCAAGTATTCCCGCGAT 14700
Query 20627 CCATTTTTGTCCCATATCTTGACTCCTGTTCT-TGAAAGCTCCCTGGAGTCAGTACTCCC 20685
||||| ||||| || | || ||| |||| ||| |||| | | ||| ||||||||
Sbjct 14699 CCATTACCTTCCCAGATATGAACGCCT-TTCTCTGAGAGCTTCTTACCGTCCGTACTCCC 14641
Query 20686 CTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTA 20744
| ||||| || | || || | | ||||| |||| || |||||||||||||
Sbjct 14640 TGATATGAACCATAGTAATTCGTGGAGGATGCCTCTGAAAAAGACACGCTTTGTGGTTA 14582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372380695840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |