Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq15 111 4e-19
>seq15
Length=115448
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||| ||||| | || || | || |||||||| || || || || |||
Sbjct 207 TCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAG 148
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| ||| | || || ||||||||||| ||||| || |||||| ||
Sbjct 147 ATCAATCTCTGCTGATCAGGAGGAATACCTTCTTTATCTTGGATCTTTTGTTTCACATTA 88
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| || || ||||| | ||||| ||||| || |||| |||||||||
Sbjct 87 TCGATCGTATCAGAAGACTCGACTTCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACG 28
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 27 AAAATCTGCAT 17
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||| ||||| | || || | || |||||||| || || || || |||
Sbjct 435 TCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAG 376
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| ||| | || || ||||||||||| ||||| || |||||||||
Sbjct 375 ATCAATCTCTGCTGATCAGGAGGAATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTA 316
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| ||||| | ||||| || || || || | |||||||||
Sbjct 315 TCGATCGTGTCTGAAGATTCGACTTCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACG 256
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 255 AAAATCTGCAT 245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653251311528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |