Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq23 93.3 9e-14
>seq23
Length=838141
Score = 93.3 bits (102), Expect = 9e-14
Identities = 360/559 (64%), Gaps = 10/559 (2%)
Strand=Plus/Minus
Query 297164 ATCTTACCTTTGAATCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCAGCAATC 297223
|||| ||||| | ||| |||||| || |||| || | | || || ||| |||
Sbjct 496821 ATCTGACCTTCCCAGCCTTTATACCAGGGGATCATCTCTAAAATCTCCTCGCCACGCATC 496762
Query 297224 AATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAA 297283
| |||| | ||| || || || |||| || |||||| || || ||| |||
Sbjct 496761 AGGCGCTGAATGTTTTCCACAATCTCTTCCGGGTTGTAAGAGGGAATCGAAGTACTCCAT 496702
Query 297284 CCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATAC 297343
|| | ||||||||| || |||||| || || | | ||||| || || ||||| |
Sbjct 496701 CCCGAACCGATTCCCTCCGCACCATTTACAAGCACCATTGGAATCACTGGAACATACCAT 496642
Query 297344 TCTGGTTCGA---TCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTA 297400
|| ||||| | ||| ||| ||||| | ||||||||| |||||||||| || |
Sbjct 496641 TCAGGTTCAACGGTCTGTTCA---TCATCTTTCAGATATTTGAGAAGATTATTATC-GAG 496586
Query 297401 TCGAC-GAAAACCTGTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGC 297459
| || ||| |||| || || | | |||| || |||||||||| |||| ||
Sbjct 496585 TGGATTGAACACCTTTCTCGTGATGGCGGAGAGTTCAGTAAAAATATATCTTGCAGCAGC 496526
Query 297460 GTGATCCTTACCACCCTGCA-ATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGA 297518
|||||||||| || ||| ||| ||||| || || | || || | ||| |
Sbjct 496525 AGCATCCTTACCA-CCGGCAGCTCTAGAACCAAATCCACCATGTGGGAAAAGAAGGTTCA 496467
Query 297519 TGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTT 297578
|| || ||| ||| |||| || || | ||| || ||| || |||||| |
Sbjct 496466 GATTGTTAGATCCAACAAAATCTTGAGCTAACGACACAATTGTCTGGATCAAAGATGCAT 496407
Query 297579 CGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGT 297638
| ||||| ||||| | ||||||| || | ||||| ||||| | || || | |
Sbjct 496406 CTCCATGATGATAACCAGTATGCTCAGCGATATAACCTTCCAACTGAGACACTTTGATTT 496347
Query 297639 CGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAAC 297698
| | |||| || || ||| | ||||| | |||| || || || |||||||
Sbjct 496346 CTCCCCTCAAGTTACGTTTGTAGCAACCATATAGGATCTTCCTCTGCGATGGCTTGAAAC 496287
Query 297699 CATCAACGACCGACGGAAT 297717
| || || || || |||||
Sbjct 496286 CGTCCACAACAGAGGGAAT 496268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878926070600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |