Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq23 93.3 9e-14 >seq23 Length=838141 Score = 93.3 bits (102), Expect = 9e-14 Identities = 360/559 (64%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 297164 ATCTTACCTTTGAATCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCAGCAATC 297223 |||| ||||| | ||| |||||| || |||| || | | || || ||| ||| Sbjct 496821 ATCTGACCTTCCCAGCCTTTATACCAGGGGATCATCTCTAAAATCTCCTCGCCACGCATC 496762 Query 297224 AATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAA 297283 | |||| | ||| || || || |||| || |||||| || || ||| ||| Sbjct 496761 AGGCGCTGAATGTTTTCCACAATCTCTTCCGGGTTGTAAGAGGGAATCGAAGTACTCCAT 496702 Query 297284 CCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATAC 297343 || | ||||||||| || |||||| || || | | ||||| || || ||||| | Sbjct 496701 CCCGAACCGATTCCCTCCGCACCATTTACAAGCACCATTGGAATCACTGGAACATACCAT 496642 Query 297344 TCTGGTTCGA---TCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTA 297400 || ||||| | ||| ||| ||||| | ||||||||| |||||||||| || | Sbjct 496641 TCAGGTTCAACGGTCTGTTCA---TCATCTTTCAGATATTTGAGAAGATTATTATC-GAG 496586 Query 297401 TCGAC-GAAAACCTGTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGC 297459 | || ||| |||| || || | | |||| || |||||||||| |||| || Sbjct 496585 TGGATTGAACACCTTTCTCGTGATGGCGGAGAGTTCAGTAAAAATATATCTTGCAGCAGC 496526 Query 297460 GTGATCCTTACCACCCTGCA-ATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGA 297518 |||||||||| || ||| ||| ||||| || || | || || | ||| | Sbjct 496525 AGCATCCTTACCA-CCGGCAGCTCTAGAACCAAATCCACCATGTGGGAAAAGAAGGTTCA 496467 Query 297519 TGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTT 297578 || || ||| ||| |||| || || | ||| || ||| || |||||| | Sbjct 496466 GATTGTTAGATCCAACAAAATCTTGAGCTAACGACACAATTGTCTGGATCAAAGATGCAT 496407 Query 297579 CGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGT 297638 | ||||| ||||| | ||||||| || | ||||| ||||| | || || | | Sbjct 496406 CTCCATGATGATAACCAGTATGCTCAGCGATATAACCTTCCAACTGAGACACTTTGATTT 496347 Query 297639 CGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAAC 297698 | | |||| || || ||| | ||||| | |||| || || || ||||||| Sbjct 496346 CTCCCCTCAAGTTACGTTTGTAGCAACCATATAGGATCTTCCTCTGCGATGGCTTGAAAC 496287 Query 297699 CATCAACGACCGACGGAAT 297717 | || || || || ||||| Sbjct 496286 CGTCCACAACAGAGGGAAT 496268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878926070600