Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq12 197 2e-45 >seq12 Length=1129233 Score = 197 bits (218), Expect = 2e-45 Identities = 1147/1808 (63%), Gaps = 43/1808 (2%) Strand=Plus/Minus Query 113602 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTT 113661 ||||||||| || ||||| ||||||| ||||||| | || | |||||||| | ||| || Sbjct 53912 GTAGTACATACCAGTCTTTAGCCCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTCAATTT 53853 Query 113662 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721 | || ||| | | | || |||||| || || ||||||| | || || Sbjct 53852 ACCCATGGTAGGAGCCTGTAAGTGGATGTTCATCGACTGCGACTGATCGAGGTAGGCACC 53793 Query 113722 ACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 113781 | || || |||||||| || | | |||| || ||||| ||||| | |||||| Sbjct 53792 TCTGTCAGCTGCCATATCGATGATAGCCTTTTGTGGGAGCTCCCAGACAGTACGGTAGAG 53733 Query 113782 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCAT 113841 || || || | |||||| | | | ||| ||||| || || | | | || Sbjct 53732 CTTTTTTATCTTATCTGGAACGTTTGGCAAATTCTGGATCGAACCGTTGTCGTGAATAAT 53673 Query 113842 GAGATCCTTCAT---ATCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAGAT 113897 | | |||||| ||| || ||||| ||| || | | || ||| || | | Sbjct 53672 AAAGTTCTTCATGGCATCATT---CCAGATACCCATATCGACAAAGTCTCTCAACATG-T 53617 Query 113898 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 113957 |||||| | |||||||| ||||| | |||| | ||||| || | ||| Sbjct 53616 AAGGATTGACGATCTGGAACTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTGA 53557 Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTG 114017 | |||||||||||||| || | |||| || |||| || || ||||| ||||| |||| Sbjct 53556 AGGGCTCAAAGCACTCGTTATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGTG 53497 Query 114018 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT 114077 ||| | || ||| | | ||| || | ||| ||| | | ||||| | Sbjct 53496 CCACCAAGAGCGAGTTTCTCAAACCGTTCTTGGCAATCTTGGACTTCAAAGAATCCCAAT 53437 Query 114078 CGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCT 114136 | | || | | | || | ||| | ||| || || | | || | ||| || Sbjct 53436 CCCAAA-GATCGGTAGGCTTCTTACCCCATAAATCGAATTGTAATAAGCCCTTGGATGCA 53378 Query 114137 GGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 114196 || || |||||| | |||| |||| ||||| | || |||| ||| ||| |||||| Sbjct 53377 GGAGAACCCTCATAGCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCCTCG 53318 Query 114197 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGC-CTCGTCGG 114254 || || ||||| || || ||||| || || || |||| || | || || | | | Sbjct 53317 AGAGCAGCGTGGTAAATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGACTG 53258 Query 114255 AATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 114314 ||||||| || || | | || || || | |||||| ||||| | | | Sbjct 53257 --TCAAACGGAAGGCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACAGCGA 53200 Query 114315 TTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCG 114373 ||| | | | ||| ||||| | || || ||| || |||||| | || || || Sbjct 53199 CTGGTCTGTTACGCATGTTAGAGTAACGTGCC-TCTGGGACAGGATAATAGTTTCTGTCA 53141 Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433 || || | || | || || | ||| || | || | ||| | ||| ||| | | Sbjct 53140 ATGACACGGTTCAAGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAAGTTG 53081 Query 114434 AAACTGCGAG-TCTCTTC-----ATT-GACATACTTAGGAAGGGCGATTGACGCCAGATT 114486 | | |||| ||| ||| ||| |||| | || ||| | || |||| || Sbjct 53080 TACCA-CGAGGTCTTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCAAGTT 53022 Query 114487 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 114546 ||| ||| || || || | | |||||| | ||| || || || || || Sbjct 53021 ACAGACACCAGTTTCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCGAGGA 52962 Query 114547 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 114606 ||| ||||| |||||||||| ||| || |||| ||||||| ||||||||||| ||||| Sbjct 52961 CTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCAT 52902 Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTG 114665 | |||| || || || || || |||| | | ||| | ||| | | || | | || Sbjct 52901 GAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAGCCTT 52842 Query 114666 GCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724 | || || ||| | | || |||||| |||||| ||||| | ||| |||||||| Sbjct 52841 G-ACGGTA-CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACTCG 52784 Query 114725 TCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 114781 || || |||| || || || || || || | ||| | || |||| ||||||| Sbjct 52783 TCTCCGTACACG---TCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGA 52727 Query 114782 CCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCC 114841 || || |||||||||||||||||| | ||| || ||||| || |||| ||| | ||| Sbjct 52726 CCGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCA 52667 Query 114842 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 114901 || || ||| || | || ||||| | | || | || || | ||| || Sbjct 52666 CGGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCT 52607 Query 114902 GCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTT 114957 |||||||| ||||||| ||||| || || | ||| ||| | ||| | |||| Sbjct 52606 GCGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTG-TTACCTCCTTGGTC 52548 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 || || || || ||| || || || |||| ||||||||| ||||||| || || Sbjct 52547 GACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACC 52488 Query 115018 ATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATA 115075 || || || ||| || ||| | | |||| | || | || || |||||||||||| Sbjct 52487 GTTGGTACCGGCGATGTAAGAGCC--AGTGGCACGAACGTTGTGAATATGCATACCAATA 52430 Query 115076 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATC 115135 || || || ||| || || || ||||| | | | | ||||||| || || || Sbjct 52429 CCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATA 52370 Query 115136 GAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCG 115195 || || |||| | || | | |||||| ||||| || || ||| ||||| || Sbjct 52369 GAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCA 52310 Query 115196 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCC 115255 ||||| | ||||| | |||||| |||| || | |||||| | |||||||| Sbjct 52309 TTGAACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCG 52250 Query 115256 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 115315 | ||| || || || || || ||||| |||| | || | ||||| || | ||| Sbjct 52249 ATGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGT 52190 Query 115316 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 115375 ||| | || | |||||| || ||| || || ||||||||| |||| | Sbjct 52189 GGTCTCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAA 52130 Query 115376 CCAAAATA 115383 ||||| || Sbjct 52129 CCAAAGTA 52122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353032514080