Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq12 197 2e-45
>seq12
Length=1129233
Score = 197 bits (218), Expect = 2e-45
Identities = 1147/1808 (63%), Gaps = 43/1808 (2%)
Strand=Plus/Minus
Query 113602 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTT 113661
||||||||| || ||||| ||||||| ||||||| | || | |||||||| | ||| ||
Sbjct 53912 GTAGTACATACCAGTCTTTAGCCCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTCAATTT 53853
Query 113662 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721
| || ||| | | | || |||||| || || ||||||| | || ||
Sbjct 53852 ACCCATGGTAGGAGCCTGTAAGTGGATGTTCATCGACTGCGACTGATCGAGGTAGGCACC 53793
Query 113722 ACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 113781
| || || |||||||| || | | |||| || ||||| ||||| | ||||||
Sbjct 53792 TCTGTCAGCTGCCATATCGATGATAGCCTTTTGTGGGAGCTCCCAGACAGTACGGTAGAG 53733
Query 113782 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCAT 113841
|| || || | |||||| | | | ||| ||||| || || | | | ||
Sbjct 53732 CTTTTTTATCTTATCTGGAACGTTTGGCAAATTCTGGATCGAACCGTTGTCGTGAATAAT 53673
Query 113842 GAGATCCTTCAT---ATCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAGAT 113897
| | |||||| ||| || ||||| ||| || | | || ||| || | |
Sbjct 53672 AAAGTTCTTCATGGCATCATT---CCAGATACCCATATCGACAAAGTCTCTCAACATG-T 53617
Query 113898 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 113957
|||||| | |||||||| ||||| | |||| | ||||| || | |||
Sbjct 53616 AAGGATTGACGATCTGGAACTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTGA 53557
Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTG 114017
| |||||||||||||| || | |||| || |||| || || ||||| ||||| ||||
Sbjct 53556 AGGGCTCAAAGCACTCGTTATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGTG 53497
Query 114018 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT 114077
||| | || ||| | | ||| || | ||| ||| | | ||||| |
Sbjct 53496 CCACCAAGAGCGAGTTTCTCAAACCGTTCTTGGCAATCTTGGACTTCAAAGAATCCCAAT 53437
Query 114078 CGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCT 114136
| | || | | | || | ||| | ||| || || | | || | ||| ||
Sbjct 53436 CCCAAA-GATCGGTAGGCTTCTTACCCCATAAATCGAATTGTAATAAGCCCTTGGATGCA 53378
Query 114137 GGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 114196
|| || |||||| | |||| |||| ||||| | || |||| ||| ||| ||||||
Sbjct 53377 GGAGAACCCTCATAGCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCCTCG 53318
Query 114197 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGC-CTCGTCGG 114254
|| || ||||| || || ||||| || || || |||| || | || || | | |
Sbjct 53317 AGAGCAGCGTGGTAAATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGACTG 53258
Query 114255 AATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 114314
||||||| || || | | || || || | |||||| ||||| | | |
Sbjct 53257 --TCAAACGGAAGGCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACAGCGA 53200
Query 114315 TTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCG 114373
||| | | | ||| ||||| | || || ||| || |||||| | || || ||
Sbjct 53199 CTGGTCTGTTACGCATGTTAGAGTAACGTGCC-TCTGGGACAGGATAATAGTTTCTGTCA 53141
Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433
|| || | || | || || | ||| || | || | ||| | ||| ||| | |
Sbjct 53140 ATGACACGGTTCAAGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAAGTTG 53081
Query 114434 AAACTGCGAG-TCTCTTC-----ATT-GACATACTTAGGAAGGGCGATTGACGCCAGATT 114486
| | |||| ||| ||| ||| |||| | || ||| | || |||| ||
Sbjct 53080 TACCA-CGAGGTCTTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCAAGTT 53022
Query 114487 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 114546
||| ||| || || || | | |||||| | ||| || || || || ||
Sbjct 53021 ACAGACACCAGTTTCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCGAGGA 52962
Query 114547 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 114606
||| ||||| |||||||||| ||| || |||| ||||||| ||||||||||| |||||
Sbjct 52961 CTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCAT 52902
Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTG 114665
| |||| || || || || || |||| | | ||| | ||| | | || | | ||
Sbjct 52901 GAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAGCCTT 52842
Query 114666 GCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724
| || || ||| | | || |||||| |||||| ||||| | ||| ||||||||
Sbjct 52841 G-ACGGTA-CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACTCG 52784
Query 114725 TCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 114781
|| || |||| || || || || || || | ||| | || |||| |||||||
Sbjct 52783 TCTCCGTACACG---TCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGA 52727
Query 114782 CCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCC 114841
|| || |||||||||||||||||| | ||| || ||||| || |||| ||| | |||
Sbjct 52726 CCGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCA 52667
Query 114842 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 114901
|| || ||| || | || ||||| | | || | || || | ||| ||
Sbjct 52666 CGGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCT 52607
Query 114902 GCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTT 114957
|||||||| ||||||| ||||| || || | ||| ||| | ||| | ||||
Sbjct 52606 GCGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTG-TTACCTCCTTGGTC 52548
Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017
|| || || || ||| || || || |||| ||||||||| ||||||| || ||
Sbjct 52547 GACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACC 52488
Query 115018 ATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATA 115075
|| || || ||| || ||| | | |||| | || | || || ||||||||||||
Sbjct 52487 GTTGGTACCGGCGATGTAAGAGCC--AGTGGCACGAACGTTGTGAATATGCATACCAATA 52430
Query 115076 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATC 115135
|| || || ||| || || || ||||| | | | | ||||||| || || ||
Sbjct 52429 CCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATA 52370
Query 115136 GAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCG 115195
|| || |||| | || | | |||||| ||||| || || ||| ||||| ||
Sbjct 52369 GAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCA 52310
Query 115196 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCC 115255
||||| | ||||| | |||||| |||| || | |||||| | ||||||||
Sbjct 52309 TTGAACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCG 52250
Query 115256 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 115315
| ||| || || || || || ||||| |||| | || | ||||| || | |||
Sbjct 52249 ATGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGT 52190
Query 115316 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 115375
||| | || | |||||| || ||| || || ||||||||| |||| |
Sbjct 52189 GGTCTCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAA 52130
Query 115376 CCAAAATA 115383
||||| ||
Sbjct 52129 CCAAAGTA 52122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353032514080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |