Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq12 140 3e-28
>seq12
Length=1129233
Score = 140 bits (154), Expect = 3e-28
Identities = 595/928 (64%), Gaps = 24/928 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||||| ||||| || || || | | || ||||
Sbjct 52113 AACTACAACTACTTTGGTTTCAAAACCTTGGAGCGTTCCTATCTATTGAGAATCAATGGT 52172
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| | ||| |||| || || ||| | ||| | || ||| |||| ||||| || ||
Sbjct 52173 AAAGTTGCAGAGAGACCACAACATCTGATTATGAGAGTTGCCGTCGGAATTCATGGTGAC 52232
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATG 93891
|| || || | || | | | | | || | | | || | ||| |||
Sbjct 52233 GATATCCCAAGAGTCATCGAGACCTATA---ACCTAATGTCCGAGCGTTATTTCACCCAC 52289
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
|| | || || ||||||| ||||| ||||| || ||||||||||| || || ||
Sbjct 52290 GCTTCTCCAACTTTGTTCAATGCGGGTACCCCACATCCGCAGATGTCTTCCTGCTTTTTG 52349
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| |||| ||| || || || || | ||| | | || || |||||
Sbjct 52350 GTTGCGATGAAGGACGATTCTATTGAAGGCATCTACGATACTTTGAAAGAGTGTGCCTTG 52409
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || || ||| || || || || || | | ||| |||| ||||||| || ||
Sbjct 52410 ATTTCGAAGACCGCCGGCGGTATTGGTATGCATATTCACAACGTTCGTGCCACTGGCTCT 52469
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|||||| ||||||||| || ||||| || || | | || ||| | || || ||||||
Sbjct 52470 TACATCGCCGGTACCAACGGTACCTCAAATGGTATTATTCCAATGATTCGTGTTTTCAAC 52529
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || | ||||| ||||| || ||| | || ||| | | || || |||
Sbjct 52530 AACACTGCCAGATACGTCGACCAAGGAGGTAACAAAAGACCAGGTGCCATTGCAGTGTAT 52589
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
| || || |||||||| ||| | | |||||| || | ||||||| || || ||
Sbjct 52590 ATGGAACCATGGCACGCAGACATCTTCGATTTCATTGATATCAGAAAGAATCATGGTAAG 52649
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | ||| | || | ||| || || ||| | || ||| | || |||
Sbjct 52650 GA---GGAAATCCGTGCCCGTGATTTGTTCCCAGCCCTATGGATTCCCGACTTGTTCATG 52706
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368
|| || || ||| | ||| |||| ||| |||| || ||| ||| || ||
Sbjct 52707 AAGCGTGTTGAGCAGAACGGTCAATGGACTCTATTTTCGCCATCCGAAGCTCCGGGCCTT 52766
Query 94369 TCCGACGTTTGTGGA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427
|| ||||| | ||| || | ||||| | ||| || | |||||||| | |||| |
Sbjct 52767 TCTGACGTGTACGGAGACGAG-TTTGAGGCCTTATACACGCGTTACGAGAGGGAGGG--A 52823
Query 94428 GGCCAGGAAG--GT--TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483
|| || || || | | ||| |||| ||||| | ||||| |||| | |||
Sbjct 52824 CGC--GGTAGACGTACCGTCAAGGCTCAGAAGTTGTGGTACCAGATTTTGGAAGCCCAGA 52881
Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAACCAG 94542
|| || ||||| || | ||| | | |||||| | ||| ||| ||| |||||
Sbjct 52882 CTGAAACCGGTACTCCATTCATGCTCTACAAGGATGCATGT-AACAGAAAGAGTAACCAA 52940
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
||| || | || |||||| |||||| | ||| |||||||||||||| | |
Sbjct 52941 CAGAACTTGGGTACCATCAAGTCCTCGAACTTATGCTGTGAGATTGTCGAGTACTCAGCA 53000
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGG 94630
|| ||||| | || ||| |||||| |||
Sbjct 53001 CCAGACGAAACTGGTGTCTGTAACTTGG 53028
Score = 104 bits (114), Expect = 2e-17
Identities = 168/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
||||||||||| || | || | || |||||||| || |||||||||| | ||
Sbjct 997989 GGTACCAATGGAGAATCAAGTGGAATTGTGCCTATGCTGCGAGTCTTCAACAGTACCGCT 997930
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
| || || |||||||||||| | | ||| || || | |||||| || ||
Sbjct 997929 CAATATGTTGACCAGGGTGGTAATAAACGACCTGGTGCTATCTGTGCCTATCTAGAACCG 997870
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
||||| ||||| | || ||| | ||| || |||||||||||| || || | |
Sbjct 997869 TGGCATGCGGATATCATGGAATTCTTAGACTTGAAAAAGAACCACGGTAAGGAAGAGATG 997810
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
|||||||| ||||| ||||| ||||| ||| | ||||| | || |||||||| || ||
Sbjct 997809 AGGGCCAGGGACCTATTCTATGCTCTTTGGATCCCAGATTTGTTCATGAAACGTGTGGAA 997750
Query 94321 AA 94322
||
Sbjct 997749 AA 997748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722730012960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |