Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq15 104 2e-17
seq1 98.7 9e-16
>seq15
Length=115448
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| ||| ||||| || | |||||||| || || |||||||| ||
Sbjct 243 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 184
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | | ||| |||| ||| || || || ||||||||| ||||||||| |||||
Sbjct 183 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 124
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || || || ||| || || || | | |||| || || | | |||||||
Sbjct 123 ATACCTTCTTTATCTTGGATCTTTTGTTTCACATTATCGATCGTATCAGAAGACTCGACT 64
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || |||| || || || |||||||||||
Sbjct 63 TCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTGCAT 17
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | || | ||| ||||| || | |||||||| || || |||||||| ||
Sbjct 471 CCACCCCTCAACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 412
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | | ||| |||| ||| || || || ||||||||| ||||||||| |||||
Sbjct 411 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 352
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || || || ||| || || || | | |||| ||||| | | ||||||
Sbjct 351 ATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACT 292
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | |||||||| || | || || || |||||||||||
Sbjct 291 TCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245
>seq1
Length=1746572
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| ||| || || || | || || || || || || ||||| || |
Sbjct 813832 CCACCTCTCAATCTCAAGACTAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 813891
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | ||| || | ||| || ||||| ||||||||| ||||||||| || ||
Sbjct 813892 AATGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 813951
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| ||| |||||||||| | || | ||||| | | ||| ||
Sbjct 813952 ATTCCCTCCTTGTCTTGGATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGACTCAACC 814011
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || ||||||| || || || ||||| |||||
Sbjct 814012 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAAATTTGCAT 814058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500348274240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |