Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq12 205 1e-47
seq4 82.4 9e-11
>seq12
Length=1129233
Score = 205 bits (226), Expect = 1e-47
Identities = 1151/1808 (64%), Gaps = 41/1808 (2%)
Strand=Plus/Minus
Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622
||||||||| || ||||| ||||||| ||||||| | || | ||||| || | ||| ||
Sbjct 53912 GTAGTACATACCAGTCTTTAGCCCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTCAATTT 53853
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682
| || ||| | | | || |||||| || || ||||||| | || ||
Sbjct 53852 ACCCATGGTAGGAGCCTGTAAGTGGATGTTCATCGACTGCGACTGATCGAGGTAGGCACC 53793
Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 115742
| || || |||||||| || | | |||| || ||||| ||||| | ||||||
Sbjct 53792 TCTGTCAGCTGCCATATCGATGATAGCCTTTTGTGGGAGCTCCCAGACAGTACGGTAGAG 53733
Query 115743 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCAT 115802
|| || || | |||||| | | | ||| ||||| || || || | ||| |
Sbjct 53732 CTTTTTTATCTTATCTGGAACGTTTGGCAAATTCTGGATCGAACCGT-TGTCGTGAATAA 53674
Query 115803 GAGA-TCCTTCAT---ATCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCACGAGG 115857
| | | |||||| ||| || ||||| ||| || | | || ||| || | |
Sbjct 53673 TAAAGTTCTTCATGGCATCATT---CCAGATACCCATATCGACAAAGTCTCTCAAC-ATG 53618
Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917
| |||||| | |||||||| ||||| | |||| | |||||||| | |||
Sbjct 53617 TAAGGATTGACGATCTGGAACTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTG 53558
Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977
| |||||||||||||| || | |||| || |||| || || ||||| ||||| |||
Sbjct 53557 AAGGGCTCAAAGCACTCGTTATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGT 53498
Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037
|||| | || ||| | | ||| | ||| ||| | | |||||
Sbjct 53497 GCCACCAAGAGCGAGTTTCTCAAACCGTTCTTGGCAATCTTGGACTTCAAAGAATCCCAA 53438
Query 116038 TCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGC 116096
|| | || | | | || | |||| | ||| || || | | || | ||| ||
Sbjct 53437 TCCCAAA-GATCGGTAGGCTTCTTACCCCATAAATCGAATTGTAATAAGCCCTTGGATGC 53379
Query 116097 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTC 116156
|| || |||||| | ||||||||| ||||| | || |||| ||| ||| |||||
Sbjct 53378 AGGAGAACCCTCATAGCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCCTC 53319
Query 116157 GAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGC-CTCGTCG 116214
||| || ||||| || || ||||| || || || |||| || | || || | |
Sbjct 53318 GAGAGCAGCGTGGTAAATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGACT 53259
Query 116215 GAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 116274
| ||||||| || || | | || || || | |||||| ||||| | |
Sbjct 53258 G--TCAAACGGAAGGCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACAGCG 53201
Query 116275 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATC 116333
| ||| | | | ||| ||||| | || || ||| || |||||| | || || ||
Sbjct 53200 ACTGGTCTGTTACGCATGTTAGAGTAACGTGCC-TCTGGGACAGGATAATAGTTTCTGTC 53142
Query 116334 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 116393
|| || | || | || || | ||| || | || | ||| | ||| ||| | |
Sbjct 53141 AATGACACGGTTCAAGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAAGTT 53082
Query 116394 AAAACTGCGAG-TCTCTTC-----ATT-GACATACTTAGGAAGGGCGATTGACGCCAGAT 116446
| | |||| ||| ||| ||| |||| | || ||| | || |||| |
Sbjct 53081 GTACCA-CGAGGTCTTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCAAGT 53023
Query 116447 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 116506
|||| ||| || || || | | |||||| | ||| || || || || ||
Sbjct 53022 TACAGACACCAGTTTCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCGAGG 52963
Query 116507 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCA 116566
||| ||||| |||||||||| ||| || |||| ||||||| ||||||||||||||||
Sbjct 52962 ACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCA 52903
Query 116567 TATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCT 116625
| |||| || || || || || |||| | | ||| | ||| | | || | | ||
Sbjct 52902 TGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAGCCT 52843
Query 116626 GGCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC 116684
| || || ||| | | || |||||| |||||| ||||| | ||||||||||||
Sbjct 52842 TG-ACGGTA-CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACTC 52785
Query 116685 TTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743
|| || ||| | || || || || || || | ||| | || |||| ||||||||
Sbjct 52784 GTCTCCGTACA-CGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGAC 52726
Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803
| || |||||| ||||||||||| | ||| || ||||| || || | ||| | ||| |
Sbjct 52725 CGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCAC 52666
Query 116804 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 116863
| || ||| || | || ||||| | | || | || || | ||| || |
Sbjct 52665 GGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTG 52606
Query 116864 CGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACGACCAGCCTGGTTT 116919
||||||| ||||||| ||||| || || | ||| ||| | ||| | ||||
Sbjct 52605 CGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTG-TTACCTCCTTGGTCG 52547
Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979
|| || || || || ||| || || |||| ||||||||| ||||||| || ||
Sbjct 52546 ACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCG 52487
Query 116980 TTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATAC 117037
|| || || ||| || ||| | |||| | || | ||| || |||||||||||||
Sbjct 52486 TTGGTACCGGCGATGTAAGAGCC--AGTGGCACGAACGTTGTGAATATGCATACCAATAC 52429
Query 117038 CCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 117097
| || || ||| || || || ||||| | | | | ||||||| || || || |
Sbjct 52428 CGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAG 52369
Query 117098 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGT 117157
| || |||| | || | | |||||| ||||| || || ||| ||||| || |
Sbjct 52368 AATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCAT 52309
Query 117158 TGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCA 117217
|||| | ||||| | |||||| |||| || | |||||| | |||||||| |
Sbjct 52308 TGAACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCGA 52249
Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGG 117277
||| || || || || || ||||| |||| | || | ||||| || | ||| |
Sbjct 52248 TGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGTG 52189
Query 117278 GTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 117337
|| | || | |||||| || ||| || || ||||||||| |||| ||
Sbjct 52188 GTCTCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAAC 52129
Query 117338 CAAAATAG 117345
|||| |||
Sbjct 52128 CAAAGTAG 52121
>seq4
Length=283631
Score = 82.4 bits (90), Expect = 9e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 163365 TACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATCCAAGTTGGTGCG 163424
||||| || || ||||||||||| ||| | ||||| ||| ||| ||| | ||||||
Sbjct 91197 TACGGCCGAGTTGCACCAAGATCAGGTTTGGCTGTCAAGCACGGGATCGATACCGGTGCG 91256
Query 163425 GGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGACAC 163484
|| ||||||||| | || || | ||| ||| | | ||||||| ||||||||| | |
Sbjct 91257 GGCGTTGTGGATGCCGATTATAGAGGAGAATTGAGGATCGTTCTTTTCAATCACAGTGAT 91316
Query 163485 ATGGATTT 163492
| ||||||
Sbjct 91317 AAGGATTT 91324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506617168160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |