Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq45 102 2e-16 seq15 86.0 1e-11 >seq45 Length=579175 Score = 102 bits (112), Expect = 2e-16 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | || || |||||||| | ||||||||| | |||||| || || Sbjct 354894 TCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCC 354953 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || |||| ||||| || || ||||| | | |||||| || || ||||| || Sbjct 354954 GTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTT 355013 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||||| || || | ||| || | | || || ||||| || || Sbjct 355014 ATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACTTCCAAGGTAAT 355073 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||||||||| | || || || |||||||| |||||| Sbjct 355074 GGTCTTACCCGTCAAGGTCTTAACGAAAATTTG---CATTTT 355112 >seq15 Length=115448 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| ||||| |||||||| |||||||| || || | | || ||||| ||||||| Sbjct 146 ATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAATATCCAGAAG 205 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGA 201024 ||||||||||||||| | ||||||||| Sbjct 206 GAGTCTACTCTTCACTTGGTTTTGAGA 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920452025092