Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq45 95.1 1e-14
seq15 86.0 7e-12
>seq45
Length=579175
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| || | | |||| |||||||| |||||||| || |||||||||||
Sbjct 354883 CCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGAC 354942
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| | |||| || | ||||| || || || ||||| | |||||| || | ||
Sbjct 354943 AAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 355002
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||| || ||||||| ||||| | | | || || || || ||
Sbjct 355003 ATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACT 355062
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|||| || ||||| || ||||||| || ||||| || |||||||||||
Sbjct 355063 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 355112
>seq15
Length=115448
Score = 86.0 bits (94), Expect = 7e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || || || | ||| |||| || | ||| |||||| |||||||||||||| ||
Sbjct 471 CCACCCCTCAACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 412
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || | | || || | |||||| ||||| || ||||| | |||||| || | ||
Sbjct 411 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 352
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || || || |||||| | || | | | | |||||| ||||| ||
Sbjct 351 ATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACT 292
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||||||||| || | || || || || || |||||
Sbjct 291 TCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237863023520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |