Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq45 95.1 1e-14 seq15 86.0 7e-12 >seq45 Length=579175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | | |||| |||||||| |||||||| || ||||||||||| Sbjct 354883 CCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGAC 354942 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | |||| || | ||||| || || || ||||| | |||||| || | || Sbjct 354943 AAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 355002 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||| || ||||||| ||||| | | | || || || || || Sbjct 355003 ATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACT 355062 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 |||| || ||||| || ||||||| || ||||| || ||||||||||| Sbjct 355063 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 355112 >seq15 Length=115448 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || || | ||| |||| || | ||| |||||| |||||||||||||| || Sbjct 471 CCACCCCTCAACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 412 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || | |||||| ||||| || ||||| | |||||| || | || Sbjct 411 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 352 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || || || |||||| | || | | | | |||||| ||||| || Sbjct 351 ATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACT 292 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||||||||| || | || || || || || ||||| Sbjct 291 TCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237863023520