Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 9e-30
seq45 136 2e-26
seq7 136 2e-26
seq15 134 5e-26
seq1 120 1e-21
seq16 93.3 2e-13
>seq5
Length=270031
Score = 147 bits (162), Expect = 9e-30
Identities = 418/638 (66%), Gaps = 12/638 (2%)
Strand=Plus/Minus
Query 451842 TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAA 451901
|||| |||||| | ||||| || | ||| ||||| || || ||||||||||
Sbjct 240504 TGAAGCCTGTTCAGCAAGTTTTGAAAGATGCTAAAGTTGACGAATCCGAAATTGATGATG 240445
Query 451902 TTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATT 451961
|||| || || || |||||||| ||||||| || ||||||| || | | | |
Sbjct 240444 TTGTTCTCGTTGGTGGTTCTACCAGAATTCCAAAGGTTCAAGAATTGCTTGAGACATTCT 240385
Query 451962 TTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTG 452021
|| ||| || | | |||||| | |||||||||||||||||||||||||||||||
Sbjct 240384 TTAAAGGTAAGAAGGTTGCTAAGAGTATCAATCCTGATGAAGCTGTTGCATATGGTGCTG 240325
Query 452022 CAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAG 452081
| |||||||| | | || || | ||| ||| | || | | ||| || | ||
Sbjct 240324 CCGTTCAAGCTGGTGTTTTATCCGGTGAAGAAGGTG------TTGAAGACATCGTTTTGA 240271
Query 452082 TAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAA 452141
| ||||| | || | || | || |||| || | ||||| | ||||||| ||| |
Sbjct 240270 TCGATGTCAATCCATTGACTTTGGGTATTGAGACTTCCGGTGGTGTTATGACTACTTTGA 240211
Query 452142 TTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATA 452201
|||| || ||| | ||||| || ||| || | ||| || || |||||
Sbjct 240210 TTAAGAGAAACACTCCAATTCCAACCAAGAAGTCGCAGATCTTTTCGACTGCTGTTGATA 240151
Query 452202 ACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATA 452261
|||||| | ||| ||||| || | ||| |||||| | || ||| | | || || |
Sbjct 240150 ACCAACAAACTGTTCTGATTCAGGTTTATGAGGGAGAAAGAGCTATGGC-CAAG--AACA 240094
Query 452262 ATAAAC--TAGGAGAATTTACTCTTTCAAAC-ATTCCTCCTATGCCAAGGGGAACTCCTC 452318
|||| | | || || || || | | ||||| ||| ||||| ||| ||| |
Sbjct 240093 ATAACCTGTTGGGTAAGTTCGAATTAAATGCAATTCCACCTGCTCCAAGAGGAGTTCCAC 240034
Query 452319 AAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAA 452378
| ||||| |||| | ||||| | ||||| || | || || ||| |||| |
Sbjct 240033 AGATTGAGGTTACATTCACACTTGATTCCAATGGAATCTTAAAGGTCTCTGCCATTGATA 239974
Query 452379 AATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAG 452438
| | |||||||| | || || ||||| ||||| || ||| | || || || |
Sbjct 239973 AGGGTACCGGAAAATCCAATTCCATCACCATTACCAATGACAAGAACAGATTGTCCAAGG 239914
Query 452439 AAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTC 452476
|||| |||||||| ||||| || |||| ||| | |||
Sbjct 239913 AAGAGATTGAAAAGATGGTGGAAGAAGGTGAACAGTTC 239876
Score = 131 bits (144), Expect = 7e-25
Identities = 206/294 (70%), Gaps = 6/294 (2%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| ||||||| |||| ||||| || |||||||| ||||| ||| | || ||||||
Sbjct 241027 GTTACCCATGCAGTTGTTACCGTTCCAGCCTATTTCAACGATGCCCAAAGACAGGCAACT 240968
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || ||||| || ||||| ||||| |||| | |||||||| || ||
Sbjct 240967 AAGGATGCTGGTACCATTGCCGGATTAAACGTTCTCAGAATCGTGAATGAACCAACTGCC 240908
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|| ||| | || || || ||| || || | ||||||||| | || | ||
Sbjct 240907 GCAGCTATTGCCTACGGTTTAG----AT--AAGGGTGATGAAGAAAAACAGATCATTGTT 240854
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
| |||| | ||||||||||| ||| |||| || | || |||| || ||| | |||
Sbjct 240853 TATGATCTAGGTGGAGGAACCTTCGATGTTTCTCTATTGTCCATTGCAGGTGGTGCCTTT 240794
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606
||||| || || |||||||| ||| |||| || |||||| | ||| ||
Sbjct 240793 GAAGTTCTTGCCACTGCCGGTGATACCCATTTAGGTGGAGAAGATTTCGATTAT 240740
>seq45
Length=579175
Score = 136 bits (150), Expect = 2e-26
Identities = 165/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||||||||| || |||| ||||| || ||||| | || || || || ||
Sbjct 355110 AATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTCTTC 355051
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| |||||| | | || || || |||||||||||||| ||||| || || |||||
Sbjct 355050 TGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGGAATCCCACCAGATCA 354991
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | || || || | || || ||| | || || || ||||||||| | || || ||
Sbjct 354990 GCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAACTTTGTCCGACTACAA 354931
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | ||||| ||||| | ||||| || | ||| |||||||
Sbjct 354930 CATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAGAGG 354886
>seq7
Length=262925
Score = 136 bits (150), Expect = 2e-26
Identities = 339/507 (67%), Gaps = 12/507 (2%)
Strand=Plus/Minus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
|| ||||||||||| ||||| || ||||| || ||||| ||||| ||||| |||||
Sbjct 220199 AACCCTGATGAAGCCGTTGCTTACGGTGCCGCTGTTCAGGCAGCCATTCTTTCAGGTGAT 220140
Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110
| | || | ||| | |||| | ||||| || || |||||||||| |
Sbjct 220139 ACTTCTTCTAAGACACAGGATTTGTTGTTGTTGGATGTGACCCCATTATCTCTTGGTATC 220080
Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTT--CTATTCCTTGTA 452168
||||| || ||||| | ||||| || ||||| | | ||||||| |||||||| |
Sbjct 220079 GAAACTGCCGGTGGTGTTATGACCAAATTAAT--ACCAAGGAACTCTACTATTCCTACAA 220022
Query 452169 AAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGT 452228
| ||| | | || || |||| ||| |||||||||||||| |||||||| |
Sbjct 220021 AGAAGTCTGAGACTTTCTCTACATATTCTGACAACCAACCAGGTGTGTTGATTCAAGTTT 219962
Query 452229 TTGAAGGAGAACGTGCAATGACACGA--GATAATAATAAACTAGGAGAATTT--ACTCTT 452284
|||||| ||| | | | || |||| ||||| || | ||| | || | | |
Sbjct 219961 ATGAAGGTGAAAGAACCA-GA-ACGAAGGATAACAACTTGTTGGGAAAGTTCGAATTGGT 219904
Query 452285 TCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGAT 452344
| | ||||||| ||||| || ||| || ||||| |||| | ||| | ||
Sbjct 219903 TGGTA--TTCCTCCAGCTCCAAGAGGTGTTCCACAGATTGAGGTTACTTTTGACATCGAC 219846
Query 452345 GCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATT 452404
||||| |||||| | || ||| || |||||||| | || || | | || |||
Sbjct 219845 GCAAACGGTATTTTGAACGTGTCCGCCGTTGAAAAGGGTACCGGTAAGACTCAGAAGATT 219786
Query 452405 ACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAA 452464
||||| || || ||||| | || || || || || ||||| || ||||| | ||
Sbjct 219785 ACAATCACCAACGATAAGGGTAGATTGTCAAAGGAGGAAATTGACAAGATGGTCAACGAT 219726
Query 452465 GCAGAAAAATTCAAGGATGATGATGAA 452491
|||||||||||||||| ||| || |||
Sbjct 219725 GCAGAAAAATTCAAGGCTGAGGACGAA 219699
Score = 123 bits (136), Expect = 1e-22
Identities = 253/372 (68%), Gaps = 13/372 (3%)
Strand=Plus/Minus
Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301
||||||| || || || |||||||| | | || ||||| || || || || ||
Sbjct 220951 CTCCTGAGGAGATCTCTTCTATGGTCTTGAACAAGATGAAGGAGACTGCTGAGGCTTAC- 220893
Query 451302 TTGGTTCTCCAG-TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAA 451360
|||| | || ||| ||||| || |||||||||| || || |||||||| | ||
Sbjct 220892 TTGGGTGAGAAGATTAACGATGCCGTCGTTACTGTTCCTGCCTACTTCAATGACTCTCAG 220833
Query 451361 CGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAAT 451420
| || || || || ||||| || ||| ||||| | || ||| | |||| || |||
Sbjct 220832 AGACAGGCCACCAAGGATGCTGGTACCATTTCTGGTATGAACGTTATGAGAATAATCAAT 220773
Query 451421 GAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAG------AAACAGAA 451474
|| ||||| || ||||| | || || || ||| || | ||| || |||||
Sbjct 220772 GAGCCTACTGCTGCTGCCATTGCTTACGGTTTAG----ATAAGAAGGGTACAAACCAGAA 220717
Query 451475 Gaaaaa-aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTC 451533
| | || ||| ||||| | |||||||| ||||| || ||| ||| ||| | | ||
Sbjct 220716 GGAGAAGAATGTTTTAATCTTTGATTTGGGTGGTGGTACTTTCGATGTCTCTCTTTTGTC 220657
Query 451534 AATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGA 451593
|| || || || | |||||||| ||||| || |||||||||||| | || |||||
Sbjct 220656 CATCGATGAAGGTATCTTTGAAGTTAAGGCTACTGCTGGTGATACTCACTTGGGTGGTGA 220597
Query 451594 AGATATTGATAA 451605
|| |||||||
Sbjct 220596 GGACTTTGATAA 220585
>seq15
Length=115448
Score = 134 bits (148), Expect = 5e-26
Identities = 164/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || ||| |||||||||| || || || | || || || || |||
Sbjct 17 ATGCAGATTTTCGTCAAGACATTGACTGGTAAGACCATCACCTTGGAAGTCGAGTCTTCT 76
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | |||||||| || |||||||| ||||| ||||||||||||||
Sbjct 77 GATACGATCGATAATGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 136
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | || || || | || || || | |||||||| ||||| | | || || |||
Sbjct 137 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 196
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || |||||||| || || ||| |||||||
Sbjct 197 ATCCAGAAGGAGTCTACTCTTCACTTGGTTTTGAGATTGAGAGG 240
Score = 107 bits (118), Expect = 8e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || ||| | || || ||||| || || | || || ||||| ||
Sbjct 245 ATGCAGATTTTCGTCAAGACATTAACAGGCAAAACCATCACCTTGGAAGTCGAATCTTCA 304
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | |||||||| || |||||||| ||||| ||||||||||||||
Sbjct 305 GACACGATCGATAACGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 364
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | || || || | || || || | |||||||| ||||| | | || || |||
Sbjct 365 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 424
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || |||||||| || || || |||| ||
Sbjct 425 ATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGGTTGAGGGG 468
>seq1
Length=1746572
Score = 120 bits (132), Expect = 1e-21
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||||||||| || |||| ||||| || ||||| | || ||||| || |||
Sbjct 814058 ATGCAAATTTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCTTCT 813999
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||||| | | || || || || ||||| ||||| |||||||| ||||||||
Sbjct 813998 GACACTATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGAATTCCACCTGATCAG 813939
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | || || || | || || || | || ||||| ||||| ||| | || || ||
Sbjct 813938 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACATTGTCAGACTACAAC 813879
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || | |||||||| || ||| |||||||
Sbjct 813878 ATCCAGAAGGAATCCACCTTGCACTTAGTCTTGAGATTGAGAGG 813835
>seq16
Length=109755
Score = 93.3 bits (102), Expect = 2e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 560251 AGAAGGTGATATGGGTAAAATTTATGGTTTTAACTGGAGACATTTTGGTGCTGATTATAT 560310
||| | |||| ||||| || || || || | ||||||||||| |||||| | ||| |
Sbjct 14742 AGAGGATGATTTGGGTCCTATCTACGGATTCCAATGGAGACATTTCGGTGCTAAGTATGT 14801
Query 560311 TAATTGTAACACCAATTATACAGGAAAAGGATTTGATCAACTTGTTAAAATTATTGAGGA 560370
||||| | ||| | ||||| ||| |||||||||||||| | | || |||||| |
Sbjct 14802 CGATTGTGATACCGACTATACCGGACAAGGATTTGATCAAATCGCTACCATTATTCATAC 14861
Query 560371 AATAAAAACCAATCCTTCTAGTAGAAGAATTTTAATGTCAGATT 560414
|||| |||||||||| ||||||||| || | |||| ||
Sbjct 14862 TCTAAAGACCAATCCTTACGATAGAAGAATCATACTATCAGCTT 14905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975716476144208
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