Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq7 457 7e-123 seq31 351 7e-91 seq5 158 9e-33 seq12 87.8 1e-11 >seq7 Length=262925 Score = 457 bits (506), Expect = 7e-123 Identities = 1006/1482 (68%), Gaps = 32/1482 (2%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || ||| |||| | ||| || | |||||| || || || | ||||| || || ||||| Sbjct 219811 TTTTCAACGGCGGACACGTTCAAAATACCGTTTGCGTCGATGTCAAAAGTAACCTCAATC 219870 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || || || ||||| |||| || || || || |||| | || |||||| || Sbjct 219871 TGTGGAACACCTCTTGGAGCTGGAGGAATACCAACCAATTCGAACTTTCCCAACAAGTTG 219930 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 ||||| || || ||| |||||| || ||| ||| || || | | ||| || Sbjct 219931 TTATCCTTCGTTCTGGTTCTTTCACCTTCATAAACTTGAATCAACACACCTGGTTGGTTG 219990 Query 517430 TCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488 || ||||| || | || | ||| || || || |||||| || | ||| || || Sbjct 219991 TCAGAATATGTAGAGAA-AGTCTCAGACTTCTTTGTAGGAATAGTAGAGTTCCTTGGTAT 220049 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC-AA 517547 | |||||||||| |||||| || ||||| | ||||||||| | || || ||||| || Sbjct 220050 TAATTTGGTCATAACACCACCGGCAGTTTCGATACCAAGAGATAATGGGGTCACATCCAA 220109 Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607 | | |||| || || || | ||| | ||| |||||| ||||| |||| || Sbjct 220110 CAACAACAA-ATCCTGTGTCTTAGAAGAAGTATCACCTGAAAGAATGGCTGCCTGAACAG 220168 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 | ||||| || ||||| ||||||||||| || | || | || | | |||||||||| Sbjct 220169 CGGCACCGTAAGCAACGGCTTCATCAGGGTTGATAGACTTGTTAGGCTCCTTACCATTGA 220228 Query 517668 AAAAATTTGAAAGAAGTTGTCTTA-CCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 | |||| | | | | ||| | |||| ||||| | | || || || || || ||| Sbjct 220229 AGAAATCGGTGACCAACT-TCTGAACCTTTGGAATTCTGGTAGAACCACCGACCAAAACA 220287 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 ||||||| ||||| ||||| || || |||| ||| ||||| || || || ||||| Sbjct 220288 ATTTCATCGACCTGGGATTTGTCAAGCTTTGCATCTCTCAAAACCTTCTCGACAGGTTCC 220347 Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846 | | | ||| || ||||| | ||||||||| |||||| | || ||||| || ||| Sbjct 220348 AAAGTAGATCTGAATAAGTCGGCACAAAGTTCCTCGAATCTTGCCCTAGT--GATCGACG 220405 Query 517847 T-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904 | || || |||||||||||| | || ||||| | |||||| | || |||| ||||| | Sbjct 220406 TGTAGAAGTCAATTCCTTCGTATAAGGAATCGATTTCAATAGATGTCTGAGCAGAAGATG 220465 Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 517964 ||| | | || || | ||||| || || |||||||||| | || | |||||| Sbjct 220466 ATAAAACTCTCTTTGCCCTCTCACAGGCAGTTCTTAGTCTTCTCAGAGCCCT--CTGATT 220523 Query 517965 G--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 518022 | ||||||| | | ||| ||||||||||| || | || | | || || | | Sbjct 220524 ACCAGTCAAATCCTTGTGATACTTTCTCTTGAATTCGTTGGCAAAGAAGGTGACCAATCT 220583 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 |||||||| || ||||| ||||| | ||||| || | ||||| | |||| || | Sbjct 220584 GTTATCAAAGTCCTCACCACCCAAGTGAGTATCACCAGCAGTAGCCTTAACTTCAAAGAT 220643 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 || || || | |||||||||| ||||| || |||||||||| |||||| || | Sbjct 220644 ACCTTCATCGATGGACAAAAGAGAGACATCGAAAGTACCACCACCCAAATCAAAGATTAA 220703 Query 518143 TACATTCATTTCTTTGTC--TTGG----TTTTTATCAAGACCATACGCAAAAGCAGCAGC 518196 |||||| | || || | ||| || ||||| | ||| || |||| |||||||| Sbjct 220704 AACATTCTTCTCCTTCTGGTTTGTACCCTTCTTATCTAAACCGTAAGCAATGGCAGCAGC 220763 Query 518197 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 ||| || ||||| || ||||||| ||| || | ||||| ||| | || ||||| || || Sbjct 220764 AGTAGGCTCATTGATTATTCTCATAACGTTCATACCAGAAATGGTACCAGCATCCTTGGT 220823 Query 518257 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA--CT 518314 ||| ||||| || || || || || || ||||||||||||| |||||||| |||| || Sbjct 220824 GGCCTGTCTCTGAGAGTCATTGAAGTAGGCAGGAACAGTAACGACGGCATC-GTTAATCT 220882 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 || | ||| | ||||| || || | ||||| || | || | ||| || || || Sbjct 220883 TC-TCACCCAAGTAAGCCTCAGCAGTCTCCTTCATCTTGTTCAAGACCATAGAAGAGATC 220941 Query 518375 TGTTCTGGGGAATATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATT 518433 | || || | | | ||| ||| |||| || || | || | ||| || Sbjct 220942 TCCTCAGGAGTGAAGACCCTGGTCTCACCCTTGA-ATTCAACCTGAATCTTTGGCTTGCC 221000 Query 518434 ACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCAT 518492 |||| | ||||| || ||||| ||||||| |||||||| ||||| || || |||| Sbjct 221001 ACCATCGTTAATCACCTTAAACGGCCAGTGCTTCATATCATTCTGAAC-CTCCGGATCAT 221059 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 || | ||||||||| | || || |||||||| | ||| || | || || || |||| Sbjct 221060 CGAACTTTCTACCAATAAGTCTCTTGGCATCAAACACAGTGTTTGCAGGGTTCATAGCAG 221119 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612 | |||| | || || || |||| | || || || || || | ||| || || | Sbjct 221120 CCTGATTCTGAGCAGCCTCACCAACTAACCTCTCGGTATCGGTGAAAGCAACGTAAGAAG 221179 Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA--C 518670 | ||||| | ||||| || ||||| |||||||| || ||| | | ||| || | Sbjct 221180 GGGTTGTTCTGTTACCCTGGTCATTGGCAATAATCTCCACTCTGTC--GTTGGCAAAGTG 221237 Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || |||||| | || || ||||| ||||| |||||||| Sbjct 221238 GCCGACACAAGAGTACGTAGTACCTAAGTCAATTCCAATAGC 221279 >seq31 Length=53359 Score = 351 bits (388), Expect = 7e-91 Identities = 941/1408 (67%), Gaps = 28/1408 (2%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| || || | ||| ||||| ||||| | |||||| || || ||||| || || || Sbjct 35381 GCAGAAACGTTCAAAATTCCATTAGCATCAATATCAAAGGTAACCTCAATCTGTGGAACA 35440 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| | || || || || || ||| | ||| | |||| || || || || Sbjct 35441 CCTCTTGGTGCTGGAGGTATACCAGTCAACTCGAATTTACCCAACAAGTTGTTGTCCTTG 35500 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || ||| ||||| || ||| || || ||| ||| || || || |||||| Sbjct 35501 GTTCTGGTTCTCTCACCTTCATAAACCTGAATTAAAACACCAGGCTGGTTGTCAGAATAA 35560 Query 517439 GTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || | || | ||| || || |||||||||| || | |||||| ||| | ||||| Sbjct 35561 GTGGAGAAGA-TCTCAGACTTCTTACAAGGAACAGTGGAGTTTCTTGGAATCAACTTGGT 35619 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGACAA 517556 ||| | |||||| || || || | ||| ||||| | || | ||||| ||| | |||| Sbjct 35620 CATGACACCACCGGCGGTCTCGATACCGAGAGATAATGGTGCAACATCCAACAACAACAA 35679 Query 517557 TATTTTGAAGTTTTTCATCAGTT-TGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACC 517614 || ||| || || | || | | ||| |||||| || || |||| |||||||| Sbjct 35680 -ATCTTGG-GTCTTAGAAGAGGTATCACCGGACAAGACG-GCGGCCTGAACGGCAGCACC 35736 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 517674 || || || ||||||||||| || | | || |||| | | || |||||||| |||| Sbjct 35737 GTAAGCGACGGCTTCATCAGGGTTGATGGATTTATTTGGCTCCTTTCCATTGAAGAAATC 35796 Query 517675 TGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 517733 || | | || ||| |||||||| || | | ||||||||||| || || || |||| Sbjct 35797 AGAGACCAATT-TCTGGACCTTAGGGATTCTGGTGGATCCTCCAACCAAGACGATCTCAT 35855 Query 517734 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCG 517793 | ||| || || |||| || || || ||||| || || || || || | | | Sbjct 35856 CAATCTGAGACTTGTCCAACTTGGAGTCGGCCAAAACCTTCTCGACTGGGTCCAAAGTAG 35915 Query 517794 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 517853 ||| |||| ||||| ||||| ||||||||| | ||||| || | | | | ||| Sbjct 35916 ATCTGAACATATCTGAGCAAAGCTCTTCGAATCTGGCTCTGGTGATGGAGGTGTAGAAAT 35975 Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 | | || ||| | | |||||||| || | | ||||||| ||||| ||||| | | Sbjct 35976 CGACACCCTCGTATAGAGAATCAATCTCGACGGAGGTTTGAGCAGAAGAGGATAGCACTC 36035 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT-TGCTGATTGATTCAAA 517972 || || | ||||| || || || | ||||| || ||| | || | | || | ||| Sbjct 36036 TCTTTGCTCTCTCACAGGCAGTTCTCAATCTTCTTAGTGCTCTCTGGTTACTGGT-CAAG 36094 Query 517973 TCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTTACAAGACGATTATCAAA 518031 || | | ||| ||||||||||| || ||| | | | | || || | | ||||||||| Sbjct 36095 TCCTTGTGATACTTTCTCTTGAATTCATTCGAGAAATGA-GTGACTAATCTATTATCAAA 36153 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 || ||||||||||| | |||| || | ||||| | || | ||| | || || || Sbjct 36154 GTCCTCACCTCCCAAATGGGTATCACCAGCGGTAGCCTTAACCTCGAAGATACCGTCCTC 36213 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 || |||||||| ||||| ||| || ||||||| ||| || ||||| || ||| Sbjct 36214 AATGCTCAAAAGAGAAACATCGAAGGTACCTCCACCCAAATCGAAGATAAGAACGTTC-- 36271 Query 518152 TTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 |||| || || || || ||||| ||||| |||| |||||||| || || || ||| Sbjct 36272 TTCTCACCCTCGGTCTTCTTGTCAAGTCCATAAGCAATGGCAGCAGCGGTAGGCTCGTTA 36331 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 || ||||||| ||| || | |||||| || | || ||||| || ||||| ||||| || Sbjct 36332 ATGATTCTCATAACGTTCAAACCAGCGATGGTACCAGCATCCTTGGTGGCCTGTCTCTGA 36391 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 |||||||| || || ||||||||||||| ||| ||||| | || | |||| | | || Sbjct 36392 GAATCGTTGAAGTAGGCAGGAACAGTAACAACAGCATCGCTCACCTTAGTACCCA-AGAA 36450 Query 518330 GCGCT-TGCCGTTTGTTTCATTTTACTTAA-AATCATTGATGAAATTTGTTCTGGGGAAT 518387 | || || || | | |||| || || || | ||| || |||| | |||||| | | Sbjct 36451 GGCCTCGGCGGTCTCTCTCATCTT-CTGAAGGACCATAGAGGAAACCTCTTCTGGTG--T 36507 Query 518388 ATTGCTTGGATTCATT--TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 | | || ||| | | ||| || | || | || ||| | ||| || Sbjct 36508 AAGGATTTTCTTCTCTCCCTTATACTGGACCTGAATTTTAGGCTTACCTGCGTCATCGAT 36567 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 |||| || ||||||| ||| |||| || || | |||| | | |||||| Sbjct 36568 GACTTCGAAAGGCCAGTGCTTCTTATCGCTCTGGACCTCTGGGTCTGAGTATTTTCTACC 36627 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || || || || || | || |||| || || || || || || | ||||| Sbjct 36628 AATAAGTCTCTTAGCGTCGAAGACTGTGTTGGAAGGGTTCATAGCGGCCTGGTTCTTGGC 36687 Query 518566 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 || || || |||| || | || || || || || | |||||| || ||||| || | | Sbjct 36688 AGCTTCACCGATCA-ATCTCTCGGTATCGGTGAAAGCAACATAAGAAGGAGTAGTTCTGT 36746 Query 518625 TACCTTGATCATTCGCAATAATTTCAAC 518652 |||| ||||| || || || || || || Sbjct 36747 TACCCTGATCGTTAGCGATGATGTCGAC 36774 >seq5 Length=270031 Score = 158 bits (174), Expect = 9e-33 Identities = 937/1479 (63%), Gaps = 47/1479 (3%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 |||||| ||||| || || | || ||||||| ||| | ||||| || ||||| Sbjct 239973 TTATCAATGGCAGAGACCTTTAAGATTCCATTGGAATCAAGTGTGAATGTAACCTCAATC 240032 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || || || ||||| |||||||||| || | | || | || | |||| ||| Sbjct 240033 TGTGGAACTCCTCTTGGAGCAGGTGGAATTGCATTTAATTCGAACTTACCCAACAGGTTA 240092 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGAT-- 517427 || | || | | || ||| ||||| ||| || || ||| |||||| | Sbjct 240093 TTGTTCTTGGCCATAGCTCTTTCTCCCTCATAAACCTGAATCAGAAC---AGTTTGTTGG 240149 Query 517428 -TATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATC 517485 |||| | ||| | ||| | |||| || || || ||||||| |||||||| | Sbjct 240150 TTATCAACAGCAGTCGAAAAGA-TCTGCGACTTCTTGGTTGGAATTGGAGTGTTTCTCTT 240208 Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 ||| | | | ||||||| |||||| | || || | ||| | || | ||| ||||||| Sbjct 240209 AATCAAAGTAGTCATAACACCACCGGAAGTCTCAATACCCAAAGTCAATGGATTGACATC 240268 Query 517546 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 517605 | | || || | || || ||| ||| | | || || | | ||||||| Sbjct 240269 GATCAAAACGATGTCTTCAACACCTTCTTCAC-----CGGATAA-AACACCAGCTTGAAC 240322 Query 517606 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 517665 |||||||||||||||||||||||||||||||| | | | | | | || ||||| || Sbjct 240323 GGCAGCACCATATGCAACAGCTTCATCAGGATTGATACTCTTAGCAACCTTCTTACCTTT 240382 Query 517666 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 517725 || || | ||| | || | ||||| ||||| | | || || ||||| | || Sbjct 240383 AAAGAATGTCTCAAGCAATTCTTGAACCTTTGGAATTCTGGTAGAACCACCAACGAGAAC 240442 Query 517726 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGG-TT 517784 || |||| | | |||| || | ||| | ||| ||||||| | ||| || || Sbjct 240443 AACATCATCAATTTCGGATTCGTCAACTTTAGCATCTTTCAAAACTTGCTGAACAGGCTT 240502 Query 517785 CAAGACCCGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT 517842 ||| | || | || | || || ||| ||| || || || |||||||| | ||| Sbjct 240503 CAAAGTCTTCT-TGAATAGATCCATGTTCAA--TTCCTCAAACTTGGCTCTAGTCAAAGT 240559 Query 517843 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 || | |||||||| || |||||||| | || || | || || ||| Sbjct 240560 CTCAGAGAAGTCAATTCCATCAGCGAAAGAATCGATCTCGATTCTGGTAGACATCTGAGA 240619 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TG 517961 ||||| | | || || ||| | || | ||| ||| | ||| || | Sbjct 240620 AGATAAAGTTCTCTTTGCCTTCTCAATTTCTCTTTTTAATCTAGCCATGGCACGAGCATT 240679 Query 517962 ATTGATTCAAATCTGTTTTATATTTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGA 518020 ||| | | || | |||| || |||| || | ||| || | | | | | Sbjct 240680 CTTGGTA-ATGTCAATGTTATGCTTCTTCTTAAACAACTTTG-CAAAGTGTCTGGCGACT 240737 Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 | || ||| |||||||| || || || | |||| || | || || |||| || Sbjct 240738 CTATAATCGAAATCTTCTCCACCTAAATGGGTATCACCGGCAGTGGCAAGAACTTCAAAG 240797 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 ||| || ||| ||||| |||| ||||| |||||| ||||| | |||| ||| | Sbjct 240798 GCACCACCTGCAATGGACAATAGAGAAACATCGAAGGTTCCTCCACCTAGATCATAAACA 240857 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTT---TTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | | || | ||| |||| | ||||| | ||| || |||| ||| || ||| Sbjct 240858 A------TGATCTGTTTTTCTTCATCACCCTTATCTAAACCGTAGGCAATAGCTGCGGCA 240911 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 ||||||||||| | ||||| | ||| || | || ||||| | || ||||| ||||| Sbjct 240912 GTTGGTTCATTCACGATTCTGAGAACGTTTAATCCGGCAATGGTACCAGCATCCTTAGTT 240971 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317 || |||||||| | |||||| ||||| || ||||| |||| ||| |||| || || | Sbjct 240972 GCCTGTCTTTGGGCATCGTTGAAATAGGCTGGAACGGTAACAACTGCATGGGTAACCTTC 241031 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 ||||| | ||| | || | || ||||| |||| |||||||| | || || || Sbjct 241032 TTACCCAAGTAATCCTCGGCAATCTGCTTCATCTTACCTAAAATCAAGGCAGAGATCTGC 241091 Query 518378 TCTGGGGAATATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACC 518436 || || | || ||||| ||| ||||| || || | | ||| || | Sbjct 241092 TCAGGAGTGTAGAACTTGGTCTCACCAGCGATAT-CGACCTCGATAACGGGTCTACTCTT 241150 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATCT-GATTGAACACTTTGGTCATTAA 518495 || || ||| || | ||| | || | ||| | | ||| || |||| || Sbjct 241151 CTGATCAACAACCTTGTAAGGCATATGCTTGACCTCTCTCTGGGTCACCTT-ATCATCAA 241209 Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 | |||||||| | || || ||| | || |||||| ||| ||| | || | Sbjct 241210 ACCTTCTACCAACGAGTCTCTTGATATCGTAGATGGTATTGTTTGTATTGGAAGATGCCT 241269 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGA 518614 ||| ||||| ||||| |||| || || | || || || |||| || || |||||| Sbjct 241270 GATTCTTGGCAGCATCACCAACCA-ATCTCTCATCTTCGGTGAATGCCACGTAGGATGGA 241328 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT----AC 518670 || | | ||||||||||||||| || | || || ||| |||| |||| | || Sbjct 241329 GTGATTCTATTACCTTGATCATTGGCCAAGATCTCCACTCTACC----TGCCTTCATAAC 241384 Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 ||| ||||| ||||||| || ||||||||||| || Sbjct 241385 ACCGACACATGAGTAAGTTGTACCCAAATCAATACCGAT 241423 Score = 111 bits (122), Expect = 1e-18 Identities = 202/293 (69%), Gaps = 16/293 (5%) Strand=Plus/Plus Query 322081 ATAGTCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTA-ATGTTCTAAATA 322139 ||| || ||||||||||| || ||||| |||| ||| | || | | ||| ||| Sbjct 240740 ATAATCGAAATCTTCTCCACCTAAATGGGTATCACCGGCAGTGGCAAGAACTTC-AAAGG 240798 Query 322140 CTCCATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAA 322199 | ||| || || || || |||||||| || || || | |||| |||||||||| Sbjct 240799 CACCACCTGCAATGGACAATAGAGAAACATCGAAGGTTCCTCCACCTAGATCATAAACAA 240858 Query 322200 TTACGTTACCACCAGtttttttATTCCATTTTTCACTTC-CTAAACCGTATGCAAGAGCT 322258 | | | ||||| ||| | | ||| |||||||||| |||| |||| Sbjct 240859 TGATCTG----------TTTTTCTTCA---TCACCCTTATCTAAACCGTAGGCAATAGCT 240905 Query 322259 GCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCA 322318 || |||||||||||||| | ||| | ||||| | ||| || ||||| || ||| ||| Sbjct 240906 GCGGCAGTTGGTTCATTCACGATTCTGAGAACGTTTAATCCGGCAATGGTACCAGCATCC 240965 Query 322319 AGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 322371 |||||| ||||| || || || || ||||| ||||| || |||| |||||| Sbjct 240966 TTAGTTGCCTGTCTTTGGGCATCGTTGAAATAGGCTGGAACGGTAACAACTGC 241018 >seq12 Length=1129233 Score = 87.8 bits (96), Expect = 1e-11 Identities = 198/290 (68%), Gaps = 11/290 (4%) Strand=Plus/Plus Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 |||| ||||| || || || ||||| || | |||| || |||| ||| |||| | Sbjct 412581 GACG-TTATCGAAGTCCTCTCCTCCTAAATGGGTATCACCGTTTGTAGATCTGACTTCAA 412639 Query 518079 AAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | | ||||||||| | | ||||| || | ||| || ||||| || | || | | Sbjct 412640 AGACTCCATCTTCGATATCCAAAATAGAAATATCGAACGTACCACCGCCTAAGTCGTAGA 412699 Query 518139 TAAGTAC-ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | || |||| | |||| | ||| || ||| ||||| || || | || | Sbjct 412700 CAGCCACTATTCCGT-CTTTCTGTTGATT-----CAAT-CCATATGCCAACGATGCTGAC 412752 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATT-AAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 || |||||||| | |||||||| || || ||| | | ||||||| || || || || Sbjct 412753 GTAGGTTCATTCACAATTCTCACTACGTTCAAGCCAACCAATTCT-CCAGCTGTCTTGGT 412811 Query 518257 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 || || ||||| ||||||||||| |||||||||||||| || |||| || Sbjct 412812 TGCCTGCCTTTGGGAATCGTTAAAGTATGCAGGAACAGTGATGACGGAAT 412861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818628629656