Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq12 223 4e-53
seq23 84.2 3e-11
>seq12
Length=1129233
Score = 223 bits (246), Expect = 4e-53
Identities = 1061/1658 (64%), Gaps = 61/1658 (4%)
Strand=Plus/Plus
Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764
|||| |||||| | ||||| | ||||| || ||||| ||| || || |||||
Sbjct 52281 TTCACCCACGCTTCTCCAACTTTGTTCAATGCGGGTACCCCACATCCGCAGATGTCTTCC 52340
Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824
|| || | |||| | ||||| ||||| || | ||||| |||| ||| | | ||
Sbjct 52341 TGCTTTTTGGTTGCGATGAAGGACGATTCTATTGAAGGCATCTACGATACTTTGAAAGAG 52400
Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884
|||||| || || ||| || || ||||| || ||||| || || | || | |||
Sbjct 52401 TGTGCCTTGATTTCGAAGACCGCCGGCGGTATTGGTATGCATATTCACAACGTTCGTGCC 52460
Query 111885 AACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 111944
| ||| || ||||| || ||| ||| ||||||||||||||||| ||||
Sbjct 52461 ACTGGCTCTTACATCGCCGGTACCAACGGTACCTCAAATGGTATTATTCCAATGATTCGT 52520
Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTAT 112000
|| || ||| ||| || | || || |||||| || | ||| || | ||
Sbjct 52521 GTTTTCAACAACACTGCCAGATACGTCGACCAAG-GAGGTAACAAAAGACCAGGTGCCAT 52579
Query 112001 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 112060
||||| ||| | || ||||||||||| || ||| | || ||| |||| | | ||
Sbjct 52580 TGCAGTGTATATGGAACCATGGCACGCAGACATCTTCGATTTCATTGATATCAGAAAGAA 52639
Query 112061 CCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 112120
|| ||| | ||||| || ||| ||| | ||| | || || |||||||| || |
Sbjct 52640 TCATGGTAAGGAGGAAATCCGTGCCCGTGATTTGTTCCCAGCCCTATGGATTCCCGACTT 52699
Query 112121 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACC 112180
||||||||| | |||||| ||| || | ||| |||| |||| ||| | | || ||
Sbjct 52700 GTTCATGAAGCGTGTTGAGCAGAACGGTCAATGGACTCTATTTTCGCCATCCGAAGCTCC 52759
Query 112181 CGGTCTCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTCTACACAAAGTAC--GAG 112235
|| || || || |||| || || |||||||| ||| | ||||| ||| |||
Sbjct 52760 GGGCCTTTC---TGACGTGTACGGAGACGAGTTTGAGGCCTTATACACGCGTTACGAGAG 52816
Query 112236 GAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAA 112294
| || | ||| ||| || || | || | || | ||||| | ||| | |
Sbjct 52817 GGAGGGACGCGGTAGAC--GTACCGT-CAAGGCTCAGAAGTTGTGGTACCAGATTTTGGA 52873
Query 112295 GTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG 112354
| || || || || ||||| |||| ||||| ||||| || || |||||| ||||||
Sbjct 52874 AGCCCAGACTGAAACCGGTACTCCATTCATGCTCTACAAGGATGCATGTAACAGAAAGAG 52933
Query 112355 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATT 112414
||| ||| |||| |||||| |||||| || ||| | || || || | || |
Sbjct 52934 TAACCAACAGAACTTGGGTACCATCAAGTCCTCGAACTTATGCTGTGAGATTGTCGAGTA 52993
Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474
||| ||| || || | ||| |||||| | || || | ||||| | |||
Sbjct 52994 CTCAGCACCAGACGAAACTGGTGTCTGTAACTTGGCTTCTCTTTGCCTCCCGGCCTTTGT 53053
Query 112475 GGATCCAGAGACAAAGACAT-TTG-----ATTATGAAAAACTCCACGAAGTTACGAAAAC 112528
|| | || |||||| | || | | || || | || | || | |||
Sbjct 53054 CGAATCTGACGAAAAGACCTCGTGGTACAACTTCGAGAAGTTGCATAAGATTGCCAAAGT 53113
Query 112529 TGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTC 112587
| | || ||| | ||| | || ||||| ||||| | ||| || || ||| || |
Sbjct 53114 TCTTACTCGGAACTTGAACCGTGTCATTGACAGAAACTATTATCCTGTCCCAGA-GGCAC 53172
Query 112588 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTAT 112647
|| | ||||| ||| | || | ||| | | | | ||||| |||||| | || || |
Sbjct 53173 GTTACTCTAACATGCGTAACAGACCAGTCGCTGTTGGTGTGCAAGGTTTAGCCGACACCT 53232
Query 112648 TCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCA-ATGCGCGT--- 112703
|| | | |||| | ||||| | | | | |||| | ||| || | |
Sbjct 53233 TCTTCCAGATGCGCCTTCCGTTTGA--CAGTCCA---GAAGCACGTCAGTTGAACATTCA 53287
Query 112704 -ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGA 112762
|| || ||||| || || ||||| ||||| ||||| ||||| |||| || | ||
Sbjct 53288 AATCTTCGAGACTATTTACCACGCTGCTCTCGAGGCATCCTCGGAACTGGCCGAAGAGGA 53347
Query 112763 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATA 112821
||| ||||||| | || |||||||||||| || || |||||| | || ||||| |||
Sbjct 53348 GGGTACATATGAGAGCTATGAGGGTTCTCCTGCATC-CAAGGGCTTATTACAATTCGATT 53406
Query 112822 TGTGGGAAGGTGAGA--CCAAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCA 112878
| ||| ||| ||| || | | || | || ||||| || | ||| ||
Sbjct 53407 TATGG---GGTAAGAAGCCTACCGATCTTTGGGATTGGGATTCTTTGAAGTCCAAGATTG 53463
Query 112879 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 112938
|||| ||| | | ||| || ||| ||||||||||||||||||| || || | |
Sbjct 53464 CCAAGAACGGTTTGAGAAACTCGCTCTTGGTGGCACCAATGCCAACAGCTTCTACTTCCC 53523
Query 112939 AAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAA 112998
| || |||| |||| || |||||||| |||| ||| |||||||||| | |||||||
Sbjct 53524 AGATTATGGGCTATAACGAGTGCTTTGAGCCCTTCACCTCGAACATCTACCAGAGAAGAG 53583
Query 112999 CCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGAT 113056
||||| || ||||| ||| ||||| | ||| | || ||| | || ||
Sbjct 53584 TTCTCGCAGGTGAGTTCCAGATCGTCAATCCTTACATGT--TGAGAGACTTTGTCGATAT 53641
Query 113057 TGGTCTCTGGTCCAAGGAT---ATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCA 113113
||| ||||| || ||| |||||| | | || | | | ||||| || ||
Sbjct 53642 GGGTATCTGG---AATGATGCCATGAAGAACTTTATTATTCACGACAACGGTTCGATCCA 53698
Query 113114 AAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAA 113173
||| | | |||||||| | || || ||| | ||||| || || ||||| ||
Sbjct 53699 GAATTTGCCAAACGTTCCAGATAAGATAAAAAAGCTCTACCGTACTGTCTGGGAGCTCCC 53758
Query 113174 GATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAG 113233
|||| | |||| || ||||| || || | ||| || | | |||| |||| ||
Sbjct 53759 ACAAAAGGCTATCATCGATATGGCAGCTGACAGAGGTGCCTACCTCGATC--AGTCGCAG 53816
Query 113234 T--ATGAATCTATTCATGGAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCACATGT 113289
| ||||| || || | || ||| || ||| || | |||| |||||| | |
Sbjct 53817 TCGATGAA--CATCCACTTACAGGCTCCTACCATGGGTAAATTGACTTCGATGCACTTCT 53874
Query 113290 ACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327
|| | ||||||||||| || || || || ||||| |||
Sbjct 53875 ACGGCTGGAAGAAGGGGCTAAAGACTGGTATGTACTAC 53912
Score = 84.2 bits (92), Expect = 3e-11
Identities = 157/230 (68%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962
||||| ||||| ||||| ||| ||| | || ||||| || || || ||| || ||
Sbjct 997989 GGTACCAATGGAGAATCAAGTGGAATTGTGCCTATGCTGCGAGTCTTCAACAGTACCGCT 997930
Query 111963 CGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCA 112019
| ||||| |||| | ||| | || || ||||| | |||||| || ||
Sbjct 997929 CAATATGTTGACCAGGGTGGTAATAAACGACCTGGTGCTATCTGTGCCTATCTAGAACCG 997870
Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079
||||| |||||||||||||| ||| | || ||| ||||| ||| | || ||| |
Sbjct 997869 TGGCATGCGGATATCATGGAATTCTTAGACTTGAAAAAGAACCACGGTAAGGAAGAGATG 997810
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 112129
|| | | || || |||| ||||| ||||| |||||| | ||||||||
Sbjct 997809 AGGGCCAGGGACCTATTCTATGCTCTTTGGATCCCAGATTTGTTCATGAA 997760
Score = 82.4 bits (90), Expect = 9e-11
Identities = 279/427 (65%), Gaps = 12/427 (3%)
Strand=Plus/Minus
Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968
||||| |||||| || || || || |||| || | || | |||||||||||| |
Sbjct 996959 TGGCATTAATGCCGACTGCATCAACTTCACAGATTCTAGGATTCACTGAATGCTTTGAGC 996900
Query 112969 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 113028
| || | ||| | ||| | ||||| | | |||||| | | | || ||
Sbjct 996899 CAATAACCTCCAACGTGTATACGCGAAGAGTGTTATCTGGAGAGCATCAGGTGGTTAATC 996840
Query 113029 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 113088
| ||||||| ||||| | | |||| || | ||| | || || ||||||| |
Sbjct 996839 ATTATCTCGTTGATGATTTGATTGAGAAAGGATTGTGGAACCGAGAAATCAAGGATCAGA 996780
Query 113089 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGT 113148
| || |||| ||| || |||||| |||| | ||||||| | || ||| |
Sbjct 996779 TAGTTGCAGCGAATGGATCGATTCAAGATATCTCGTCTATTCCACAATTCATGAAGGATA 996720
Query 113149 TGTACCGCACAGTTTGGGAAAT--CA-AGATGAAGGATGTCATTGACATGGCCGCAGATC 113205
|||| || ||||| ||||| || || ||| || | ||||||| ||||| ||||||
Sbjct 996719 TGTATCGAACAGTATGGGAGATATCACAGAG--AGTAA-TCATTGATATGGCAGCAGATA 996663
Query 113206 GTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCT--ATTCATGGAAA-GTCCAACGA 113262
| | || | |||||||||| |||||| ||||||| ||| | | | || | |
Sbjct 996662 GAGCTCCATACATTGATCAATCGCAAAGTCTGAATCTTTATTTACGTACCTGTTCCA--- 996606
Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322
|||| ||||| | ||||| | || |||||||||||| || || || || ||||
Sbjct 996605 TGTCAAAGCTTACCAGCATGCATTTCTATGCTTGGAAGAAGGGACTTAAGACAGGTATGT 996546
Query 113323 ATTACCT 113329
|||| ||
Sbjct 996545 ATTATCT 996539
>seq23
Length=838141
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/108 (79%), Gaps = 2/108 (2%)
Strand=Plus/Plus
Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 102265
|| ||| |||||||||| ||||| || |||| | || | |||||| |||||| ||||| |
Sbjct 742617 GAAGGTGTCTTCTTCTCCGGTTCATT-TGCGGCCATCTTTTGGCTAAAGAAGAGAGGTTT 742675
Query 102266 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313
||||||||||| |||||| ||||| ||||||| | ||||| ||
Sbjct 742676 GATGCCAGGTCTTACCTTCTCGAACGAACTTATCTGCAGAGACGAAGG 742723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741810294720
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