Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq12 304 2e-77
seq23 86.0 7e-12
>seq12
Length=1129233
Score = 304 bits (336), Expect = 2e-77
Identities = 950/1443 (66%), Gaps = 45/1443 (3%)
Strand=Plus/Minus
Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGT 105955
||||| ||| ||||| || ||||| ||||||| | |||||||||| ||| ||||
Sbjct 53611 TTGACGATCTGGAACTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTGAAGGGC 53552
Query 105956 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 106015
|||||||| || |||| |||| || || | || || ||||||||||||||||||| |
Sbjct 53551 TCAAAGCACTCGTTATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGTGCCACC 53492
Query 106016 AAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC-----CTTGAGAACATCCCAGT 106070
|| || ||| | | ||| || |||| || || ||| | | |||||| |
Sbjct 53491 AAGAGCGAGTTTCTCAAACCGTT---CTTG--GCAATCTTGGACTTCAAAGAATCCCAAT 53437
Query 106071 CGTAGTTGAGCTTGGTTT-CACCTTCCCACATA--TCAAATTG-AAGCACCCCTTGGGAC 106126
| | || | ||| | ||| || |||| || ||||| || | ||||||| |
Sbjct 53436 CCCAA---AGATCGGTAGGCTTCTTACCCCATAAATCGAATTGTAATAAGCCCTTGG-AT 53381
Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCC 106186
| |||||||||||| | ||||||| | ||| | |||| |||| ||| || |||
Sbjct 53380 GCAGGAGAACCCTCATAGCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCC 53321
Query 106187 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT-- 106244
|| || | ||||| || || || || ||||| || |||| || |||||
Sbjct 53320 TCGAGAGCAGCGTGGTAAATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGA 53261
Query 106245 CTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303
||| ||||| | | || ||| | | || || || | |||||| ||||| | |
Sbjct 53260 CTG--TCAAACG-GAAGGCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACA 53204
Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCT 106362
| | ||||||| ||||| ||||| | || || ||| || |||||| | |||||
Sbjct 53203 GCGACTGGTCTGTTACGCATGTTAGAGTAACGTGCC-TCTGGGACAGGATAATAGTTTCT 53145
Query 106363 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 106422
||||||||| ||||| | || |||| || || | || | ||| | || || |
Sbjct 53144 GTCAATGACACGGTTCAAGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAA 53085
Query 106423 ATCAAAAGTGCGAG-TCTCTTC-----ATT-GACATACTTTGGAAGGGCGATTGATGCCA 106475
| | |||| ||| ||| ||| |||| | || ||| | || ||||
Sbjct 53084 GTTGTACCA-CGAGGTCTTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCA 53026
Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535
| || || ||| | || || || ||| |||||| | ||| || || ||||| |
Sbjct 53025 AGTTACAGACACCAGTTTCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCG 52966
Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595
| ||| || || ||||| |||| ||||||||||||| |||| || |||||||||||||
Sbjct 52965 AGGACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGA 52906
Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCG 106654
||||| | || || || || || ||||| | | | ||| | ||||| | || | |
Sbjct 52905 GCATGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAG 52846
Query 106655 GCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713
|| | || | ||| || ||||||||| |||||| ||||| | ||| |||||
Sbjct 52845 CCTTG-ACGGTA-CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAA 52788
Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 106773
||| || || | |||| || || || || || | | ||| | || |||| ||||||
Sbjct 52787 CTCGTCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTG 52728
Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833
||| || |||||| ||||||||||| | ||| |||||||| |||| || || | |||
Sbjct 52727 ACCGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATC 52668
Query 106834 TC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 106892
| ||| || || || | ||| || || || | |||| ||| || | ||| |
Sbjct 52667 ACGGGCACGGA-TTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGT 52609
Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 106948
| ||||||||||| || | ||| ||||| || | || |||| | || ||||
Sbjct 52608 CTGCGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTG-TTACCTCCTTGG 52550
Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008
| || || | || ||| ||| || || |||| ||||||||||||||||| ||| |
Sbjct 52549 TCGACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTA 52490
Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068
|| || || || || ||| | |||| | || | || || ||||| ||||||
Sbjct 52489 CCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATA 52430
Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128
|| || || ||| || || |||||||| | | ||| | ||||| || | ||
Sbjct 52429 CCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATA 52370
Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188
|| || ||||| | || | | ||||| ||||||||||| ||| ||||| |||
Sbjct 52369 GAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCA 52310
Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCC 107248
||||| | ||||| | ||||| |||| || | |||||| || || |||||
Sbjct 52309 TTGAACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCG 52250
Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGG 107308
| ||| || || || || || || |||| ||| || | ||||| || | |||
Sbjct 52249 ATGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGT 52190
Query 107309 GGT 107311
|||
Sbjct 52189 GGT 52187
>seq23
Length=838141
Score = 86.0 bits (94), Expect = 7e-12
Identities = 258/389 (66%), Gaps = 22/389 (6%)
Strand=Plus/Minus
Query 169184 ACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCG 169243
||| ||||| || |||||||| | ||| ||| | ||||||||||||| | ||||| |
Sbjct 495796 ACCTTTGATATGCGAACCATCGTGATCCTGATCGGCCATAATCATAAGATGTCCATATCT 495737
Query 169244 AAG----TTCAGAA---ACATCTTGGTAGTCTTTTCCT-TGTTGAAGACCCAAGATCTTC 169295
|| ||||| || || | ||| || ||| | ||||| ||||||| |||| |
Sbjct 495736 TAGACTCTTCAGGTTTGAC-TCCTCGTAC-CTCTTCTTGTGTTGTAGACCCATAATCTGC 495679
Query 169296 TTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGCTGTGCCACTGAAGCGTCGCGGA 169350
|| | | | | | ||||||||| | || ||| ||| ||||| || || || |
Sbjct 495678 TTAATAGCCTGAATCTCTTGGTTCTTCATAATCTGATCTG---CACTG--GCTTCACGCA 495624
Query 169351 CATTCTTACA-CTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAG 169409
| ||| ||| ||| || || |||||| | || |||| || | ||| ||||| |
Sbjct 495623 CGTTCA-ACAGCTTACCTCGTAGAGGATAACAACCGTAGTAATTTCTTCCTACGACCGCC 495565
Query 169410 AGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTT 169469
| ||| || ||||| | || || ||||||||||| || | || | || |||||
Sbjct 495564 AAACCTGCCACCGCCAAAGTCAAGGCAGAATCACCCTCAGTAAGGATCAACGTGCACTTG 495505
Query 169470 CCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTTG 169529
| || | ||| || || |||| || || ||||| || ||| || |||||| |
Sbjct 495504 TAACCTTCCCGCGTTCCTGCTCTGTTAGCATCCTCCAATTTTGGATATCCGGTAATTCTA 495445
Query 169530 GACTTGCGAGCACCATCGGTTTTCTTGAG 169558
||| || ||||| ||||||||||
Sbjct 495444 TTCTTTCGGCTTCCATCCATTTTCTTGAG 495416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980239518240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |