Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 >seq3 Length=302914 Score = 113 bits (124), Expect = 5e-20 Identities = 227/334 (68%), Gaps = 11/334 (3%) Strand=Plus/Plus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||| |||||||||||| || ||| | || || || ||||| | | ||| Sbjct 130110 ATTGGTAAAGGCTACTATGGAACCCATATGCCCGCTGTTATCCAAAGAAACATCATGGAG 130169 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 || || |||||| || ||||| ||||| ||||| || ||| | || || || |||||| Sbjct 130170 AACCCAGCTTGGTATACCTCTTATACTCCTTATCAGGCAGAGGTGTCCCAAGGTAGATTG 130229 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 || || | || | || ||| || | ||| || ||||| ||| | || | || || Sbjct 130230 GAGGCCCTTTTGACTTTCCAGACTGTGATCGTTGATCTTACTGGACTCCCCGTGGCCAAT 130289 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAATTCT 153446 ||||| || | ||||||| ||||| || || || || ||| | | | | | | Sbjct 130290 GCATCCCTTCTTGATGAAGGTACTGCTGCTGCGGAGGCTATGATCATGTCCTTCCACCAT 130349 Query 153447 ACAAGAGATAAGAAG---ACTGTCATAGTTGATAAAGATATATTCCC----ACAGACTCT 153499 || |||| ||||||| ||| |||| |||||| |||| | ||| ||||||| | Sbjct 130350 ACCAGAGGTAAGAAGAGAACTTTCATTGTTGAT-AAGA---ACACCCATGAACAGACTAT 130405 Query 153500 AGCAGTTCTAGAGACCAGAGCAAAACCATTGGGC 153533 || || | || ||||||| || |||| ||| Sbjct 130406 TGCTGTGATCAAGTCCAGAGCTAATACATTAGGC 130439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212249747840