Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 5e-20
>seq3
Length=302914
Score = 113 bits (124), Expect = 5e-20
Identities = 227/334 (68%), Gaps = 11/334 (3%)
Strand=Plus/Plus
Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266
|| ||| |||| |||||||||||| || ||| | || || || ||||| | | |||
Sbjct 130110 ATTGGTAAAGGCTACTATGGAACCCATATGCCCGCTGTTATCCAAAGAAACATCATGGAG 130169
Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326
|| || |||||| || ||||| ||||| ||||| || ||| | || || || ||||||
Sbjct 130170 AACCCAGCTTGGTATACCTCTTATACTCCTTATCAGGCAGAGGTGTCCCAAGGTAGATTG 130229
Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386
|| || | || | || ||| || | ||| || ||||| ||| | || | || ||
Sbjct 130230 GAGGCCCTTTTGACTTTCCAGACTGTGATCGTTGATCTTACTGGACTCCCCGTGGCCAAT 130289
Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAATTCT 153446
||||| || | ||||||| ||||| || || || || ||| | | | | | |
Sbjct 130290 GCATCCCTTCTTGATGAAGGTACTGCTGCTGCGGAGGCTATGATCATGTCCTTCCACCAT 130349
Query 153447 ACAAGAGATAAGAAG---ACTGTCATAGTTGATAAAGATATATTCCC----ACAGACTCT 153499
|| |||| ||||||| ||| |||| |||||| |||| | ||| ||||||| |
Sbjct 130350 ACCAGAGGTAAGAAGAGAACTTTCATTGTTGAT-AAGA---ACACCCATGAACAGACTAT 130405
Query 153500 AGCAGTTCTAGAGACCAGAGCAAAACCATTGGGC 153533
|| || | || ||||||| || |||| |||
Sbjct 130406 TGCTGTGATCAAGTCCAGAGCTAATACATTAGGC 130439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212249747840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |