Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 >seq3 Length=302914 Score = 111 bits (122), Expect = 2e-19 Identities = 223/330 (68%), Gaps = 3/330 (1%) Strand=Plus/Plus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||| |||| |||||||||||| | ||| | || || || ||||| | | ||| Sbjct 130110 ATTGGTAAAGGCTACTATGGAACCCATATGCCCGCTGTTATCCAAAGAAACATCATGGAG 130169 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 || || |||||| || ||||| ||||| ||||| || ||| | || || || |||||| Sbjct 130170 AACCCAGCTTGGTATACCTCTTATACTCCTTATCAGGCAGAGGTGTCCCAAGGTAGATTG 130229 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 || || | || | || ||| || | ||| || || || ||||| || | || || Sbjct 130230 GAGGCCCTTTTGACTTTCCAGACTGTGATCGTTGATCTTACTGGACTCCCCGTGGCCAAT 130289 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATTCT 158121 ||||| || | ||||||| ||||| || || || || ||| | | | | | | Sbjct 130290 GCATCCCTTCTTGATGAAGGTACTGCTGCTGCGGAGGCTATGATCATGTCCTTCCACCAT 130349 Query 158122 ACAAGAGATAAGAAG---ACTGTCATAGTTGATCAAGATATATTTCCACAGACTCTAGCA 158178 || |||| ||||||| ||| |||| |||||| | | | | ||||||| | || Sbjct 130350 ACCAGAGGTAAGAAGAGAACTTTCATTGTTGATAAGAACACCCATGAACAGACTATTGCT 130409 Query 158179 GTTCTAGAGACCAGAGCAAAACCATTAGGC 158208 || | || ||||||| || |||||||| Sbjct 130410 GTGATCAAGTCCAGAGCTAATACATTAGGC 130439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050641351360