Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7 260 1e-63 seq31 152 4e-31 seq23 129 5e-24 seq15 118 9e-21 seq5 105 5e-17 seq45 91.5 1e-12 >seq7 Length=262925 Score = 260 bits (288), Expect = 1e-63 Identities = 576/852 (68%), Gaps = 20/852 (2%) Strand=Plus/Minus Query 551743 CTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATC 551802 ||||| | || |||| || ||| ||||| || |||||| ||| ||| |||| Sbjct 220666 CTCTTTTGTCCATCGATGAAGGTATCTTTGAAGTTAAGGCTACTGCTGGTGATACTCACT 220607 Query 551803 TTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAA 551862 | ||||| || || |||||||| ||| |||| | | | || | || || || ||| Sbjct 220606 TGGGTGGTGAGGACTTTGATAACAGATTGGTCACCTTCTTTGCCAACGAATTCAAGAGAA 220547 Query 551863 AAAA-CA-AAGTTGATCTATCTAC--ATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCT 551918 | | || ||| ||| | || ||| | | ||||| | | ||||||||||| Sbjct 220546 AGTATCACAAG--GATTTGACTGGTAATCAG--AGGGCTCTGAGAAGACTAAGAACTGCC 220491 Query 551919 TGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCA 551978 || || || || || ||| | | |||||| | |||| || |||||||| | ||||| Sbjct 220490 TGTGAGAGGGCAAAGAGAGTTTTATCATCTTCTGCTCAGACATCTATTGAAATCGATTCC 220431 Query 551979 TTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGT 552038 |||| || |||||||| | | ||| | || | ||||| | ||| || || ||||| Sbjct 220430 TTATACGAAGGAATTGACTTCTACACGTCGATCACTAGGGCAAGATTCGAGGAACTTTGT 220371 Query 552039 TCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATT 552098 | || | || ||| || | ||||| || || | ||||| |||||| ||||| || Sbjct 220370 GCCGACTTATTCAGATCTACTTTGGAACCTGTCGAGAAGGTTTTGAGAGATGCAAAGCTT 220311 Query 552099 GATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATT 552158 || |||||| | || |||||||||| | || ||||| ||||| |||||||| || || Sbjct 220310 GACAAATCCCAGGTCGATGAAATTGTTTTGGTCGGTGGTTCTACCAGAATTCCAAAGGTT 220251 Query 552159 CGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGAT 552218 | | || | | || ||||||||||| | || | | | || || ||| Sbjct 220250 CAGAAGTTGGTCACCGATTTCTTCAATGGTAAGGAGCCTAACAAGTCTATCAACCCTGAT 220191 Query 552219 GAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAA 552278 || || ||||| || |||||||| |||| ||||| |||||||| || | ||| | Sbjct 220190 GAAGCCGTTGCTTACGGTGCCGCTGTTCAGGCAGCCATTCTTTCAGGTGATACTTCTTCT 220131 Query 552279 AAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGT 552337 || ||| || |||| ||| | ||||| || || ||||||||||| | ||||| | Sbjct 220130 AAGACACAGGAT-TTGTTGTTGTTGGATGTGACCCCATTATCTCTTGGTATCGAAACTGC 220072 Query 552338 TGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCG 552397 || ||| ||||||| || | || || || ||||||||||| || || ||| | Sbjct 220071 CGGTGGTGTTATGACCAAATTAATACCAAGGAACTCTACTATTCCTACAAAGAAGTCT-G 220013 Query 552398 TGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAG 552456 | ||| ||||| ||||| || || ||| | | ||| |||||| ||| |||||| | Sbjct 220012 AGACTTTCTCTACATATTCTGACAACCAACCAGGTGTGTTGATTCAAGTTTATGAAGGTG 219953 Query 552457 AAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAATTTAGAAGGTATT 552512 |||||| || || ||||| |||||| || | || | || | |||||| Sbjct 219952 AAAGAACCAGAACGAAGGATAA----CAACTTGTTGGGAAAGTTCGAATTGGTTGGTATT 219897 Query 552513 CCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGA 552572 ||||| ||||| | || || || || ||||| |||||||| || ||||| || || || Sbjct 219896 CCTCCAGCTCCAAGAGGTGTTCCACAGATTGAGGTTACTTTTGACATCGACGCAAACGGT 219837 Query 552573 ATTTTGAATGTG 552584 |||||||| ||| Sbjct 219836 ATTTTGAACGTG 219825 Score = 170 bits (188), Expect = 2e-36 Identities = 376/555 (68%), Gaps = 18/555 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG--TTTGGCAAAATGGT 550048 |||||| || || || ||||| || || || |||||| || |||| ||| | Sbjct 221280 AGCTATTGGAATTGACTTAGGTACTACGTACTCTTGTGTCGGCCACTTTGCCAAC--GAC 221223 Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 | ||| || |||||||||||||| || ||||||||||| || || ||||| ||| ||||| Sbjct 221222 AGAGTGGAGATTATTGCCAATGACCAGGGTAACAGAACAACCCCTTCTTACGTTGCTTTC 221163 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 || || || || ||||||||||| || || | |||| || || || ||| | Sbjct 221162 ACCGATACCGAGAGGTTAGTTGGTGAGGCTGCTCAGAATCAGGCTGCTATGAACCCTGCA 221103 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | |||||||| || | | ||||| |||| || ||||| || |||||| Sbjct 221102 AACACTGTGTTTGATGCCAAGAGACTTATTGGTAGAAAGTTCGATGATCCGGAGGTTCAG 221043 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 ||||||||||| ||||| || | | |||| | | ||| || || | ||| | Sbjct 221042 AATGATATGAAGCACTGGCCGTTTAAGGTGATTAACGATGGTGGCAAGCCAAAGATTCAG 220983 Query 550289 GCT-ACTCATGAAGGATCTGTTAAACAA---TTTTCA--CCAGAACAAATTTCATCTATG 550342 | | | | | |||| || | || | | |||| || || | || || |||||| Sbjct 220982 GTTGAAT--TCAAGG----GTGAGACCAGGGTCTTCACTCCTGAGGAGATCTCTTCTATG 220929 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGC 550401 || || | || ||||| | || | | | | || |||| ||||| ||| ||||| Sbjct 220928 GTCTTGAACAAGATGAAGGAGACTG-CTGAGGCTTACTTGGGTGAGAAGATTAACGATGC 220870 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || | ||||| || || || || |||||||| || | || || || || |||||||| Sbjct 220869 CGTCGTTACTGTTCCTGCCTACTTCAATGACTCTCAGAGACAGGCCACCAAGGATGCTGG 220810 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 ||| |||| | || ||| | | || |||||||| |||||||||||||| |||| Sbjct 220809 TACCATTTCTGGTATGAACGTTATGAGAATAATCAATGAGCCTACTGCTGCTGCCATTGC 220750 Query 550522 ATATGGACTTGATAA 550536 || || | ||||| Sbjct 220749 TTACGGTTTAGATAA 220735 >seq31 Length=53359 Score = 152 bits (168), Expect = 4e-31 Identities = 449/686 (65%), Gaps = 12/686 (2%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 |||||||| || || ||||| || ||| || || ||| | |||||||| | | || Sbjct 36060 AGAACTGCCTGTGAGAGAGCAAAGAGAGTGCTATCCTCTTCTGCTCAAACCTCCGTCGAG 36001 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | ||||| ||| ||||| | |||| | || | || | || |||| ||| ||| Sbjct 36000 ATTGATTCTCTATACGAGGGTGTCGATTTCTACACCTCCATCACCAGAGCCAGATTCGAA 35941 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || |||| || ||| | || ||| || | || ||||| || | ||||| || Sbjct 35940 GAGCTTTGCTCAGATATGTTCAGATCTACTTTGGACCCAGTCGAGAAGGTTTTGGCCGAC 35881 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 || ||| | || || || | | |||| || || | ||||| ||||| || ||||| Sbjct 35880 TCCAAGTTGGACAAGTCTCAGATTGATGAGATCGTCTTGGTTGGAGGATCCACCAGAATC 35821 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTT 552209 ||||| | | || || | | || |||||||| || | |||| || | Sbjct 35820 CCTAAGGTCCAGAAATTGGTCTCTGATTTCTTCAATGGAAAGGAGCCAAATAAATCCATC 35761 Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || ||||| || || || || ||||| || |||| || || | | || || | Sbjct 35760 AACCCTGATGAAGCCGTCGCTTACGGTGCTGCCGTTCAGGCCGCCGTCTTGTCCGGTGAT 35701 Query 552270 AC-TGATGAAAAACTACAAAATATTGTACTTGTAG-ATGTTACTCCTCTATCTCTTGGTT 552327 || | | || || ||| || |||| |||| | ||||| | || ||||||| ||| Sbjct 35700 ACCTCTTCTAAGACC-CAAGAT-TTGTTGTTGTTGGATGTTGCACCATTATCTCTCGGTA 35643 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | || || | || ||| | ||||| || | || ||||| | ||| ||||||||| Sbjct 35642 TCGAGACCGCCGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCCACTGTTCCTTGTA 35583 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 | || ||| | || || || ||||| || || || ||| |||| |||||| ||| Sbjct 35582 AGAAGTCTGAGATCTTCTCCACTTATTCTGACAACCAGCCTGGTGTTTTAATTCAGGTTT 35523 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG----GTACTTTTAATTTA 552503 |||||| || |||| || || || || ||||||| ||| || | || Sbjct 35522 ATGAAGGTGAGAGAACCAGAACCAAGGACAA----CAACTTGTTGGGTAAATTCGAGTTG 35467 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 ||||| ||||| || || | || || || || ||||| ||||| || ||||| ||| Sbjct 35466 ACTGGTATACCTCCAGCACCAAGAGGTGTTCCACAGATTGAGGTTACCTTTGATATTGAT 35407 Query 552564 GCCAATGGAATTTTGAATGTGACTGC 552589 || |||||||||||||| || |||| Sbjct 35406 GCTAATGGAATTTTGAACGTTTCTGC 35381 Score = 129 bits (142), Expect = 5e-24 Identities = 367/553 (66%), Gaps = 16/553 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGT-TTGGCAAA--ATGGT 550048 || || ||||| ||| | || ||||| || ||||| ||| || || || || || Sbjct 36834 GCAATCGGTATCGATCTCGGTACCACCTACTCATGTGTCGGTCACTTCGCCAACGATCGT 36775 Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 || || || || || || ||||| ||||||||||||||||| ||||||||| ||||| Sbjct 36774 ---GTCGACATCATCGCTAACGATCAGGGTAACAGAACTACTCCTTCTTATGTTGCTTTC 36718 Query 550109 ACGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 || || || || | ||| | | ||||| || || || | || ||| || || ||| | Sbjct 36717 ACCGATACCGAGAGATTGA-TCGGTGAAGCTGCCAAGAACCAGGCCGCTATGAACCCTTC 36659 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||| || | || || ||||| | | ||||| |||| | || | || || Sbjct 36658 CAACACAGTCTTCGACGCTAAGAGACTTATTGGTAGAAAATACTCAGACCCAGAGGTCCA 36599 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 | |||| |||||| ||||||||| || | | ||| | || || ||| | ||| | Sbjct 36598 GAGCGATAAGAAGCACTGGCCTTTCGAAGTCATCGATGACGCAGGTAAGCCTAAAATTCA 36539 Query 550288 AG-CTACTCATGAAGGATCTGTTAA-ACAAT--TTTCACCAGAACAAATTTCATCTATGG 550343 | | | | || | ||| | || | ||| || |||||||| | |||| ||||||| Sbjct 36538 GGTCCAGT-ATAAGGGA---GAGAAGAAAATCCTTACACCAGAAGAGGTTTCCTCTATGG 36483 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | ||| |||| | | || ||| || || | ||| | || | ||||| | Sbjct 36482 TCCTTCAGAAGATGAGAGAGACCGCCGAGGCCTTCTTGGGTACTAAGGTGAGCGATGCTG 36423 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | ||||| || || || || || || || || | || || || || |||||||| Sbjct 36422 TTGTTACTGTTCCTGCCTACTTCAACGATTCTCAGAGACAGGCCACCAAGGATGCTGGTA 36363 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || ||||| | || ||| | | || || || || ||||| |||||||| |||| | Sbjct 36362 CCATCGCTGGTTTGAACGTTATGAGAATCATTAACGAGCCTACCGCTGCTGCCATTGCTT 36303 Query 550524 ATGGACTTGATAA 550536 |||||||||| || Sbjct 36302 ATGGACTTGACAA 36290 >seq23 Length=838141 Score = 129 bits (142), Expect = 5e-24 Identities = 323/487 (66%), Gaps = 8/487 (2%) Strand=Plus/Minus Query 368611 TGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGT 368670 ||||| || || | ||| ||||| ||||| || ||| ||| | || || || ||| Sbjct 735441 TGGGGTACACCGCTCCCACTATGGGTGTCTGACGACTTTGATGAAGTCGTGTGCATCGGT 735382 Query 368671 TCAATTAAAGAATTGCAAGAAT-TATCTGGTGTGCAAAATATTAGTGATTTACATATTGA 368729 || || | |||||| ||||| |||| ||||| ||| | |||| |||| | || | || Sbjct 735381 TCCATCGATGAATTG-AAGAAGCTATCAGGTGTTCAAGACATTACTGATATCCACAGGGA 735323 Query 368730 TAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTTGA 368789 ||||||||||||||||| ||||| || |||||||| | ||| ||| | |||| || Sbjct 735322 TAAAATTGATCACATTACCATTCCTTCCAAGAAAGGCCATGGTCAATTACATAGAGTCGA 735263 Query 368790 AGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCC 368849 | ||| || || |||||||| || || || || ||||| | || | | || ||||| Sbjct 735262 GGAAGTGTTTGACTGCTGGTTCGAGTCCGGCTCAATGCCGTTTGCTTCCAAGCACTATCC 735203 Query 368850 ATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGA 368909 ||| || ||| | |||| || | ||| | || || ||| | | || Sbjct 735202 ATTCGAGAACAGTGAGAACTTCCATGCT-----TCATTCCCT-GCAGACTTTATCTCTGA 735149 Query 368910 ATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTT 368969 | | | ||||| || ||||| ||||| |||||||| || || || | || Sbjct 735148 AGGATTAGATCAGACTCGTGGCTGGTTCTATACCCTTACCGTTTTGGGAACTCACTTATT 735089 Query 368970 CGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCA 369029 | ||| | ||| ||| || || || || ||||||||| ||| |||| ||| | Sbjct 735088 CAATACTGCCCCTTATAAGAACGTTATCGTTGATGGTATTGTGCTAGCAGCTGACGGTAA 735029 Query 369030 AAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGG 369089 || ||||| ||| || | || ||| | ||||| || ||| | | | |||| ||| Sbjct 735028 GAAAATGTCGAAACGTTTGAAGAACTATCCGGATCCAAACATTATCTTGAACAAATATGG 734969 Query 369090 TGCTGAT 369096 ||| ||| Sbjct 734968 TGCCGAT 734962 >seq15 Length=115448 Score = 118 bits (130), Expect = 9e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| || ||||| |||||| | || || |||||||| || | ||| Sbjct 198 ATATTGTAGTCAGAAAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTC 139 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||||||||||||||| |||||||||||||| || |||||||| || || || ||| Sbjct 138 TGCTGATCAGGAGGAATACCTTCTTTATCTTGGATCTTTTGTTTCACATTATCGATCGTA 79 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || | | ||| | || | || |||||||| | || || |||||||| || Sbjct 78 TCAG-AAGACTCGACTTCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTG 20 Query 563472 CATA 563475 |||| Sbjct 19 CATA 16 Score = 104 bits (114), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| || ||||| |||||| | || || |||||||| || | ||| Sbjct 426 ATATTGTAGTCAGAAAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTC 367 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||||||||||||||| |||||||||||||| || |||||||| || || || || Sbjct 366 TGCTGATCAGGAGGAATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTG 307 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || | | ||| | || | ||||| || || | || || |||||||| || Sbjct 306 TCTG-AAGATTCGACTTCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTG 248 Query 563472 CATA 563475 |||| Sbjct 247 CATA 244 >seq5 Length=270031 Score = 105 bits (116), Expect = 5e-17 Identities = 357/550 (65%), Gaps = 16/550 (3%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||||| || || || || ||||| |||||| | | |||| ||| Sbjct 241423 ATCGGTATTGATTTGGGTACAACTTACTCATGTGTCGGTGTTATGAAGGCAGGTAGAGTG 241364 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || | ||||||||||||||||| |||| |||||||| || || | ||||| ||| Sbjct 241363 GAGATCTTGGCCAATGATCAAGGTAATAGAATCACTCCATCCTACGTGGCATTCACCGAA 241304 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||| || ||||||||||| || || |||| || || ||| | | |||||| Sbjct 241303 GATGAGAGATTGGTTGGTGATGCTGCCAAGAATCAGGCATCTTCCAATACAAACAATACC 241244 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || | ||| || | | |||| ||||| ||| ||||| | ||| ||| Sbjct 241243 ATCTACGATATCAAGAGACTCGTTGGTAGAAGGTTTGATGATAAGGTGACCCAGAGAGAG 241184 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTA- 550292 | |||||| ||||| | | ||||| || | | ||| ||| || | | | Sbjct 241183 GTCAAGCATATGCCTTACAAGGTTGTTGATCAGAAGAGTAGACCCGTTATCGAGGTCGAT 241124 Query 550293 ----CTCATGAAGGATC-TGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 || ||| || | ||| ||| | || || || || || | || |||| Sbjct 241123 ATCGCTGGTGA--GACCAAGTTCTACA-----CTCCTGAGCAGATCTCTGCCTTGATTTT 241071 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAA 550406 | || ||||| || | ||| | | || |||| ||||| ||||| ||||||| Sbjct 241070 AGGTAAGATGAAGCAGATTGCC-GAGGATTACTTGGGTAAGAAGGTTACCCATGCAGTTG 241012 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || ||||| ||||| || || | ||| | || || ||||| |||||||| | Sbjct 241011 TTACCGTTCCAGCCTATTTCAACGATGCCCAAAGACAGGCAACTAAGGATGCTGGTACCA 240952 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| ||| | || ||||| | || | |||||||| ||||| || || |||| || | Sbjct 240951 TTGCCGGATTAAACGTTCTCAGAATCGTGAATGAACCAACTGCCGCAGCTATTGCCTACG 240892 Query 550527 GACTTGATAA 550536 | | ||||| Sbjct 240891 GTTTAGATAA 240882 >seq45 Length=579175 Score = 91.5 bits (100), Expect = 1e-12 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | ||| ||||| || | | |||||| || || | ||| || || |||| Sbjct 354918 TTCCTTTTG-AATGTTGTAGTCGGACAAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAA 354976 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | ||| |||||||| || || ||||| || ||||||||||| || || || || Sbjct 354977 AGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTATCTTGAATCTTCTGCTTGACAT 355036 Query 563402 CCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 ||||| ||||||| || | | ||| | |||| || ||||| || | || ||| Sbjct 355037 TGTCAATGGTATCAG-AAGACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTA 355095 Query 563461 ACGAAAATTTGCAT 563474 |||||||||||||| Sbjct 355096 ACGAAAATTTGCAT 355109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291980777240