Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 4e-13 >seq16 Length=109755 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824 |||| || ||||| || ||| | | ||| || || || | |||||| || | || Sbjct 15205 TGGGGAACGGTCTTGGGATCCTGGCAATCTGTGTTTTAAGGGCTTCCACATGGTTACAGT 15146 Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGAC-GTGA 29883 | ||||||| ||||||| | ||||| || || || ||||| | | || ||| Sbjct 15145 ACACGTGAGAATCTCCCATGACATGGACGAATTCACCAGGTTCCATATTGCACACTGTG- 15087 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 || |||||||| ||||| |||| ||| ||| ||||||||||| || || || ||||| Sbjct 15086 GCTATCATGTAGGTGAGTAGAGCGTAAGAGGCAATGTTAAAGGGAACACCAAGACCCATA 15027 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACA 29969 || | ||| |||||||| | ||| || Sbjct 15026 TCGCACGATCTCTGGTACATCTGGCA 15001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617221517948