Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq45 98.7 1e-15 >seq45 Length=579175 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 197028 CTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTA--CATCTGGTTGTCGGGA 197085 ||| ||||| || || |||||||||||||| | ||||||||| || ||| |||| || Sbjct 221289 CTCCTCGCTGAATCCAGTACCGATCTTACAGACGGATTCGTATTCACCTG--TGTCTTGA 221346 Query 197086 TTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAG 197145 |||||| | || | |||||| |||| || || || ||||| ||| ||| | | Sbjct 221347 TTGTAAGATGCCAACAAGAAACCGCCATACCAACCGGTCCTCTTACCCTTACCGATATAA 221406 Query 197146 CCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGT 197205 || || || || || ||||||| | |||| || ||||| | ||||| || || || Sbjct 221407 CCGCCTATTACAACAAGATCCAATGAATCGCCGACACCTTCAAGATAATCCTTTTTGAGC 221466 Query 197206 TTGAGCCAGCTTCTAGA 197222 |||||||| |||| || Sbjct 221467 TTGAGCCAATTTCTGGA 221483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676728957106880