Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq15 116 3e-21
seq1 96.9 3e-15
>seq15
Length=115448
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| | || ||| ||||| || || || ||| || || |||||||| |||||
Sbjct 471 CCACCCCTCAACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 412
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| ||| | | || || ||||||||||||||||| |||| || ||| ||||| | |||
Sbjct 411 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 352
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || || || || ||||||||||| || | | | | ||||| | || ||
Sbjct 351 ATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACT 292
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || || || || || || |||||||||||
Sbjct 291 TCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || || ||| || || |||||||| ||||| || ||| | | ||
Sbjct 229 CAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACCATC 170
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| ||||||||||||||||| |||| || ||| ||||| | |||| || || || ||
Sbjct 169 TTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGAATACCTTCTTTATC 110
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||||||||| ||| | | | | || || | ||| || |||| || || ||
Sbjct 109 TTGGATCTTTTGTTTCACATTATCGATCGTATCAGAAGACTCGACTTCCAAGGTGATGGT 50
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || || || |||||||||||
Sbjct 49 CTTACCAGTCAATGTCTTGACGAAAATCTGCAT 17
>seq1
Length=1746572
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || || || ||||| || || | ||| | || |||||||||||||| |||||
Sbjct 813868 TCCTTCTGGATGTTGTAGTCTGACAATGTTCTGCCATCCTCCAACTGCTTACCAGCAAAG 813927
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || ||| ||||| | |||| ||||||||||| ||||| || || |||
Sbjct 813928 ATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTCTGCTTGACATTG 813987
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || || || | ||| ||||||| ||||| || || || ||||| || || ||
Sbjct 813988 TCAATAGTGTCAGAAGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACG 814047
Query 48756 AAAATCTGCAT 48766
||||| |||||
Sbjct 814048 AAAATTTGCAT 814058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937247156548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |