Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq23 109 1e-18 >seq23 Length=838141 Score = 109 bits (120), Expect = 1e-18 Identities = 374/572 (65%), Gaps = 21/572 (4%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| ||||||||||||||||| || || |||||| || |||||||| ||| Sbjct 742185 GATATTTGGCAGATGTACAAGAAGGCTGAAGCATCTTTCTGGACTGCGGAAGAGATCGAT 742244 Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT-CCAAAGACGAGCAGCATTT- 25586 || | ||||| | | |||| | ||| || |||| || || |||| Sbjct 742245 CTCTCAAAGGATGTTCCTGACTGGAAGAACAAGCTTAATGCCAATGAA-AGAT--ATTTC 742301 Query 25587 -TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGT 25645 || || || |||||||| |||||||| |||||||||||||| || | |||||| || Sbjct 742302 ATCGCACGT--GTGTTGGCCTTCTTTGCCGCCTCTGATGGTATCGTTGATGAGAATTTGA 742359 Query 25646 GCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGA 25705 | | ||||| | | || ||| ||||| | | |||||||| ||||||| Sbjct 742360 TTCAAAACTTCACACAGAACGTTCAGCTGCCAGAGGCTAGGGCCTTCTACGGATTCCAGA 742419 Query 25706 TGGCCATCGAAAATGTGCACTCTGAGGTGTATGC---CAAGCTTCTGATGACGTACATTA 25762 | | || || | || |||||| ||| | | |||| || || ||| | | Sbjct 742420 TCATGGTGGAGAACATCCATTCTGAGACCTATTCTCTCTTGCTT--GAA-ACCTACGTGA 742476 Query 25763 CAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGA 25822 |||| || ||| | ||| |||||| || || ||| || ||| Sbjct 742477 CAGATAAGAAGGAATCTGATTACTTATTTAATGCCATTGAAACTATTCCCCCAATTAAGG 742536 Query 25823 GGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGC-GAGCGG 25881 ||||| ||||| | |||||||||||| || || || | || || | Sbjct 742537 AAAAGGCATTATGGGCTCTTCGTTGGATCAACAGCAAGGATGC-ACTATACGCAGAAAGA 742595 Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 |||| ||||| || ||| | || || |||| ||| |||||| |||||||||||||| Sbjct 742596 TTGGTCGCCTTCGCCGCTATCGAAGGTGTCTTCTTCTCCGGTTCATTTGCGGCCATCTTT 742655 Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001 ||||| ||| ||| || ||||| || || ||| || ||||| || ||| |||| Sbjct 742656 TGGCTAAAGAAGAGAGGTTTGATGCCAGGTCTTACCTTCTCGAACGAACTTATCTGCAGA 742715 Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 ||||| ||| | || | ||||| |||||||| Sbjct 742716 GACGAAGGTTTACATACCGATTTCGCCTGCCT 742747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843917597440