Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 109 6e-19 >seq3 Length=302914 Score = 109 bits (120), Expect = 6e-19 Identities = 192/278 (69%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 139806 TCTTGATCAACTATTACAGT---CTTCTTATCTCTTGTAGAATTATATGCTAACAGCATT 139862 |||| |||||| || | ||| ||||||| |||| ||| | | | | | ||| Sbjct 130386 TCTT-ATCAACAATGAAAGTTCTCTTCTTACCTCTGGTATGGTGGAAGGACATGATCATA 130328 Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922 ||||| || || ||||| ||||||| | || ||||| || || | || | ||| ||| Sbjct 130327 GCCTCCGCAGCAGCAGTACCTTCATCAAGAAGGGATGCATTGGCCACGGGGAGTCCAGTA 130268 Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982 || || ||| | || ||| || | || | || |||||||| || || || | ||| Sbjct 130267 AGATCAACGATCACAGTCTGGAAAGTCAAAAGGGCCTCCAATCTACCTTGGGACACCTCT 130208 Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATG 140042 || ||||| ||||| ||||| || |||||| || ||||| | | ||||| || || Sbjct 130207 GCCTGATAAGGAGTATAAGAGGTATACCAAGCTGGGTTCTCCATGATGTTTCTTTGGATA 130148 Query 140043 ACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 || | ||| || |||||||||||| |||| ||| || Sbjct 130147 ACAGCGGGCATATGGGTTCCATAGTAGCCTTTACCAAT 130110 Score = 91.5 bits (100), Expect = 2e-13 Identities = 176/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| || | ||||| || | || ||| | | | | ||| || | || || || Sbjct 130954 AGTCCTTCAGGTCCATGGTAGACAGCGTAGGCTGCTGCAACATTGGCCAAAAGAGCCTGA 130895 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || || |||||||| ||||| || || | | ||||||||| ||||||||||| || Sbjct 130894 GCAGTACAGATGTTGGAAGTTGCCTTTTCACGACGAATATGCTGTTCTCTAGTTTGAAGC 130835 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | ||| | ||||| ||||| || || || ||| || | ||| || || Sbjct 130834 GCAAGTCTTAACGCAGGCTTGCCAAGTCTATCAGTGGAGATACCAACCAATCTTCCTGGC 130775 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||| | |||| | ||| | || ||||| ||||| ||||| || ||| ||||| Sbjct 130774 ATCTTCCGCTTAAGTTCCTCTCTAACGGCGAAGAAGGCAGCGTGAGGTCCACCGAATCCC 130715 Query 139500 ATAGGAATACCAAACCTTTG 139519 || |||| ||| ||||| || Sbjct 130714 ATTGGAACACCGAACCTCTG 130695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997849951520