Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 6e-19
>seq3
Length=302914
Score = 109 bits (120), Expect = 6e-19
Identities = 192/278 (69%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 139806 TCTTGATCAACTATTACAGT---CTTCTTATCTCTTGTAGAATTATATGCTAACAGCATT 139862
|||| |||||| || | ||| ||||||| |||| ||| | | | | | |||
Sbjct 130386 TCTT-ATCAACAATGAAAGTTCTCTTCTTACCTCTGGTATGGTGGAAGGACATGATCATA 130328
Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922
||||| || || ||||| ||||||| | || ||||| || || | || | ||| |||
Sbjct 130327 GCCTCCGCAGCAGCAGTACCTTCATCAAGAAGGGATGCATTGGCCACGGGGAGTCCAGTA 130268
Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982
|| || ||| | || ||| || | || | || |||||||| || || || | |||
Sbjct 130267 AGATCAACGATCACAGTCTGGAAAGTCAAAAGGGCCTCCAATCTACCTTGGGACACCTCT 130208
Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATG 140042
|| ||||| ||||| ||||| || |||||| || ||||| | | ||||| || ||
Sbjct 130207 GCCTGATAAGGAGTATAAGAGGTATACCAAGCTGGGTTCTCCATGATGTTTCTTTGGATA 130148
Query 140043 ACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080
|| | ||| || |||||||||||| |||| ||| ||
Sbjct 130147 ACAGCGGGCATATGGGTTCCATAGTAGCCTTTACCAAT 130110
Score = 91.5 bits (100), Expect = 2e-13
Identities = 176/260 (68%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
||||| || | ||||| || | || ||| | | | | ||| || | || || ||
Sbjct 130954 AGTCCTTCAGGTCCATGGTAGACAGCGTAGGCTGCTGCAACATTGGCCAAAAGAGCCTGA 130895
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| || |||||||| ||||| || || | | ||||||||| ||||||||||| ||
Sbjct 130894 GCAGTACAGATGTTGGAAGTTGCCTTTTCACGACGAATATGCTGTTCTCTAGTTTGAAGC 130835
Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439
|| | ||| | ||||| ||||| || || || ||| || | ||| || ||
Sbjct 130834 GCAAGTCTTAACGCAGGCTTGCCAAGTCTATCAGTGGAGATACCAACCAATCTTCCTGGC 130775
Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499
||||| | |||| | ||| | || ||||| ||||| ||||| || ||| |||||
Sbjct 130774 ATCTTCCGCTTAAGTTCCTCTCTAACGGCGAAGAAGGCAGCGTGAGGTCCACCGAATCCC 130715
Query 139500 ATAGGAATACCAAACCTTTG 139519
|| |||| ||| ||||| ||
Sbjct 130714 ATTGGAACACCGAACCTCTG 130695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997849951520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |