Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq12 284 1e-71
seq3 82.4 9e-11
>seq12
Length=1129233
Score = 284 bits (314), Expect = 1e-71
Identities = 1096/1690 (65%), Gaps = 55/1690 (3%)
Strand=Plus/Plus
Query 75269 GTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||| | ||||| || || |||||| | || |||| ||||| | ||||| |
Sbjct 52245 GTCATCGAGACCTATAACCTAATGTCCGAGCGTTATTTCACCCACGCTTCTCCAACTTTG 52304
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||||||| ||||| ||| ||||||||||| ||||| | | || | |||||
Sbjct 52305 TTCAATGCGGGTACCCCACATCCGCAGATGTCTTCCTGCTTTTTGGTTGCGATGAAGGAC 52364
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
|| || || | || ||||| | ||| | | |||||||| || || ||| ||
Sbjct 52365 GATTCTATTGAAGGCATCTACGATACTTTGAAAGAGTGTGCCTTGATTTCGAAGACCGCC 52424
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| ||||| || || | || | |||| | ||| || || ||
Sbjct 52425 GGCGGTATTGGTATGCATATTCACAACGTTCGTGCCACTGGCTCTTACATCGCCGGTACC 52484
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| ||| ||| ||||||||||||||||| |||| || || ||| ||| || | ||
Sbjct 52485 AACGGTACCTCAAATGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCAGATAC 52544
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCA 75624
|| | |||| | || | ||| ||| |||| || || || |||||||||||||
Sbjct 52545 GTCGACCAAG-GAGGTAACAAAAGACCAGGTGCCATTGCAGTGTATATGGAACCATGGCA 52603
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|| || ||| | || ||| |||| | || || || ||| | || || || |||
Sbjct 52604 CGCAGACATCTTCGATTTCATTGATATCAGAAAGAATCATGGTAAGGAGGAAA-TCCGTG 52662
Query 75685 TA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743
| ||| | || || |||| |||||||| ||| | ||||||||||| |||||| ||
Sbjct 52663 CCCGTGATTTGTTCCCAGCCCTATGGATTCCCGACTTGTTCATGAAGCGTGTTGAGCAGA 52722
Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803
||||||||| |||| || | ||| | | || || || || || |||| | || |
Sbjct 52723 ACGGTCAATGGACTCTATTTTCGCCATCCGAAGCTCCGGGCCTTTCTGACGTGTACGGAG 52782
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863
| |||||||| ||| | ||||| || || |||||| | | | ||| ||||
Sbjct 52783 ACGAGTTTGAGGCCTTATACACGCGTTACGAGAGGGAGGGACGCGGTA----GAC-GTAC 52837
Query 75864 C----AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| || | | || ||| ||| | ||| | || | ||||| || || || || ||
Sbjct 52838 CGTCAAGGCTCAGAAGTTGTGGTACCAGATTTTGGAAGCCCAGACTGAAACCGGTACTCC 52897
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
|| ||||| ||||||||||| ||||||| |||||||||||| |||| ||||| || ||
Sbjct 52898 ATTCATGCTCTACAAGGATGCATGTAACAGAAAGAGTAACCAACAGAACTTGGGTACCAT 52957
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
|||| ||| || | ||| || ||| | |||||| ||| || || || | |||
Sbjct 52958 CAAGTCCTCGAACTTATGCTGTGAGATTGTCGAGTACTCAGCACCAGACGAAACTGGTGT 53017
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC-AAT-----GAAGAGA-CTCGCA 76091
|| || ||||| || | ||| || | |||| ||| ||| ||| ||||
Sbjct 53018 CTGTAACTTGGCTTCTCTTTGCCTCCCGGCCTTTGTCGAATCTGACGAAAAGACCTCG-T 53076
Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151
| | | || || | ||| | || | || || |||| || | ||||| |
Sbjct 53077 GGTACAACTTCGAGAAGTTGCATAAGATTGCCAAAGTTCTTACTCGGAACTTGAACCGTG 53136
Query 76152 TCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210
||||||||||||| | |||||| || ||| || || | ||||| ||||| |||||
Sbjct 53137 TCATTGACAGAAACTATTATCCTGTCCCAGA-GGCACGTTACTCTAACATGCGTAACAGA 53195
Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATT 76269
|| | | | | ||||| |||||| | || || || | | ||| || | | ||
Sbjct 53196 CCAGTCGCTGTTGGTGTGCAAGGTTTAGCCGACACCTTCTTCCAGATGCGCCTTC-CGTT 53254
Query 76270 TGATTCAG--ATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327
||| ||| ||||| || |||| || ||||| || || || || |||||
Sbjct 53255 TGA--CAGTCCAGAAGCACGTCAGTTGAACATTCAAATCTTCGAGACTATTTACCACGCT 53312
Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387
| || ||||| | ||| |||| |||| | ||| | ||||||| | |||||||
Sbjct 53313 GCTCTCGAGGCATCCTCGGAACTGGCCGAAGAGGAGGGTACATATGAGAGCTATGAGGGT 53372
Query 76388 TCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGA--TATGTGGGAAGGTG-AAACCAAGCT 76443
||||| || | ||||||| | || || || || |||| || ||| | ||| | ||
Sbjct 53373 TCTCCTGCAT-CCAAGGGCTTATTACAATTCGATTTATGGGGTAAGAAGCCTACCGATCT 53431
Query 76444 CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 76503
| || |||||| | | ||| || |||| ||| | | ||| ||
Sbjct 53432 ---TTGGGATTGGGATTCTTTGAAGTCCAAGATTGCCAAGAACGGTTTGAGAAACTCGCT 53488
Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563
||| ||||||||||||||||||| || || | || || |||| |||| || |||||
Sbjct 53489 CTTGGTGGCACCAATGCCAACAGCTTCTACTTCCCAGATTATGGGCTATAACGAGTGCTT 53548
Query 76564 TGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGT 76623
||| || | ||| | |||||||||| ||||||| |||||||||||||| || ||
Sbjct 53549 TGAGCCCTTCACCTCGAACATCTACCAGAGAAGAGTTCTCGCAGGTGAGTTCCAGATCGT 53608
Query 76624 CAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGAT---ATGAA 76680
||| || | | | ||| | | || ||| ||||| || ||| |||||
Sbjct 53609 CAATCCTTACATGTTGAGAGACTTTGTCGATATGGGTATCTGG---AATGATGCCATGAA 53665
Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740
| | | || | | | ||||| || || ||| | || | | |||||| | ||
Sbjct 53666 GAACTTTATTATTCACGACAACGGTTCGATCCAGAATTTGCCAAACGTTCCAGATAAGAT 53725
Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGC 76800
|| || |||||||| || || ||||| || || | | |||| || ||||| ||
Sbjct 53726 AAAAAAGCTCTACCGTACTGTCTGGGAGCTCCCACAAAAGGCTATCATCGATATGGCAGC 53785
Query 76801 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG--TC 76856
|| | ||| || | | |||| |||| ||| ||||| || || | || ||
Sbjct 53786 TGACAGAGGTGCCTACCTCGATC--AGTCGCAGTCGATGAA--CATCCACTTACAGGCTC 53841
Query 76857 CAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCG 76916
| || ||| || | |||| ||||| | |||| ||||| ||||||| || || |
Sbjct 53842 CTACCATGGGTAAATTGACTTCGATGCACTTCTACGGCTGGAAGAAGGGGCTAAAGACTG 53901
Query 76917 GAATGTACTA 76926
| ||||||||
Sbjct 53902 GTATGTACTA 53911
>seq3
Length=302914
Score = 82.4 bits (90), Expect = 9e-11
Identities = 196/294 (67%), Gaps = 2/294 (1%)
Strand=Plus/Plus
Query 175207 GACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATAT 175266
|||| || ||||| || || ||| ||||| | || |||||||| || || ||||||
Sbjct 63728 GACGAGGCTAAAGAAGAGATTATGGAGTTTGTGAACTTCCTCAAGCATCCGGAAAGATAT 63787
Query 175267 TTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGA 175326
| ||||| ||||| || |||| || ||||| ||| || ||||| ||
Sbjct 63788 GAGCGTTTGGGTGCAAAGATTCCAAGAGGTGCAATTCTCTGCGGTCCTCCTGGTACCGGT 63847
Query 175327 AAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTC 175385
|||||| | | || || | || || ||| | || |||||| || | ||| ||
Sbjct 63848 AAGACCTTGTTGGCTAAGGCTACTGCTGGAGAAGCCGCAGTTCCATTCTATTCTGTG-TC 63906
Query 175386 TGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTT 175445
| | | || || || |||||||||||||| ||||| |||||||| || | ||
Sbjct 63907 CGGTTCGGAGTTCGTTGAAATGTTTGTTGGTGTCGGTGCTTCCAGGGTTCGTGACTTGTT 63966
Query 175446 TGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
||| |||| | || ||| || | ||||| ||| | ||||| ||||||||
Sbjct 63967 CAAAACCGCCAGAGAGAATGCTCCTTCGATTGTGTTCGTCGATGAAATTGATGC 64020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569033258880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |