Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 3e-22
seq67 95.1 4e-14
>seq12
Length=1129233
Score = 122 bits (134), Expect = 3e-22
Identities = 505/780 (65%), Gaps = 29/780 (4%)
Strand=Plus/Plus
Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTCACAGC 155649
|| |||| ||||||||| ||| | || | | ||| || ||||| |||| ||||||||
Sbjct 997436 GAGGCCAAATTACATACGGCAATTTCATCCT--TCGATGAATATTCAACAACCTCACAGC 997493
Query 155650 ACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCAT 155709
| || || || |||||||| || || |||| ||||| || || ||| || ||||
Sbjct 997494 AAAGATTCGAGGATTTGATGGTTCCCAAGTTCTGTTGGTTCGACTTGGAGTTGCAGGCAT 997553
Query 155710 CCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGA 155769
|||| || || | | | || |||||||| || |||||| || ||||| ||| |
Sbjct 997554 CCTTATAAAGCAAGAAAGGAGTTCCTGTTTCAGTCTGTGAAATTAGGATCTTCTCCCACA 997613
Query 155770 GGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGC- 155828
| ||| || | | || | || || ||| |||||||| || ||
Sbjct 997614 CTTTACGAGCCCTCACCTGACGAATATAAGATCCCCGCGATTCATATTTGCAGTAGAGTT 997673
Query 155829 GTTC---GGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAAC 155885
|||| || || || || |||| ||| | |||||| || |||| |||||
Sbjct 997674 GTTCAAAGG--ATTTTCCCC--AACAGTCAGATAATCCAGGACAGGTATCCTCCGAAAAC 997729
Query 155886 AGCGACCAAATTTTATTACCGATT---ACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| ||| | || || || || ||||| | ||| || | ||| ||||| |
Sbjct 997730 AGGCTCCACACTTCAT---CGTTTTCCACACGTTTCATGAACAAATCTGGGATCCAAAGA 997786
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
|||||||| |||||||| ||| | ||| || | ||||| ||||| | ||||||
Sbjct 997787 GCATAGAATAGGTCCCTGGCCCTCATCTCTTCCTTACCGTGGTTCTTTTTCAAGTCTAAG 997846
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATA--CATAGCAAAACTACCA-TTC--C 156057
|||||| ||||| | ||| || || ||||| || || | | |||| ||
Sbjct 997847 AATTCCATGATATCCGCATGCCACGGTTCTAGATAGGCACAG--ATAGCACCAGGTCGTT 997904
Query 156058 TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117
| || |||||||| || ||||| |||| || | |||||||| | |||||||| | ||
Sbjct 997905 TATTACCACCCTGGTCAACATATTGAGCGGTACTGTTGAAGACTCGCAGCATAGGCACAA 997964
Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGA-ATATGCGAACCAGATGAGCGAACATTATGA 156176
| ||| | || |||||||| || ||| |||| | || | || | |||||
Sbjct 997965 TTCCACTTGATTCTCCATTGGTACC-CGATATATAGGTTCCTGCTGCCCTTACATTGCTT 998023
Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTG 156236
| ||| | ||||| ||||| | ||| || || ||| |||| | || |||
Sbjct 998024 AAATGCATACCAATTCCACCGGCAGCTTTCGATATCATAGCACATTTGTGAACTGTACGA 998083
Query 156237 AAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTA-ATTGAGG 156295
|| || || || | ||| ||||| || | ||| | || | || || || |||| ||
Sbjct 998084 AAGATCCCATCTAGAGAGTCATCCTCTAATGAAACCAGGAAACATGACGATAGATTGGGG 998143
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
| || || || ||||| || || |||| |||||||| ||| ||||| | |||||
Sbjct 998144 AACT-CAGTACCCGCATTGAAAAGGGTGGGTGATGCATGAAGAAAGTACTTCCTTGACAT 998202
Score = 104 bits (114), Expect = 7e-17
Identities = 130/175 (74%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 155588 AATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTCA 155645
|| ||| |||| ||||| || |||| || | | || |||| || || |||||||||
Sbjct 53036 AAGAGAAGCCAAGTTACAGACACCAGTTTCGTC-TGGT-GCTGAGTACTCGACAATCTCA 52979
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
||||| | ||| || ||||||||| || || |||| |||||| || ||||||||
Sbjct 52978 CAGCATAAGTTCGAGGACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACAT 52919
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCT 155760
||||||||||| || ||| |||| || || || || |||| || |||| |||||
Sbjct 52918 GCATCCTTGTAGAGCATGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCT 52864
Score = 98.7 bits (108), Expect = 3e-15
Identities = 176/257 (68%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| || || || || || || | ||||| || ||||| |||| | ||| |||||||||
Sbjct 52561 TTACCTCCTTGGTCGACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATA 52502
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
||||| || || || ||||| ||| || | || |||| | ||||| || ||||||
Sbjct 52501 CCATTTGAGGTACCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATA 52442
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| | |||||||| || | || ||||| || || || || | ||||| | |
Sbjct 52441 TGCATACCAATACCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAG 52382
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|| |||||||||||||| || | ||| | | | | |||| ||| | || || ||
Sbjct 52381 ATGCCTTCAATAGAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGT 52322
Query 156300 GGTGTTCCAGCGTTGAA 156316
|| || || || |||||
Sbjct 52321 GGGGTACCCGCATTGAA 52305
>seq67
Length=395348
Score = 95.1 bits (104), Expect = 4e-14
Identities = 123/168 (73%), Gaps = 3/168 (2%)
Strand=Plus/Plus
Query 303627 TTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTC 303686
||| || | ||| | ||||||||||||||| || ||||| ||||| || || | ||| |
Sbjct 359428 TTGTGGAACATGCATATTCATCTCATCACCATCGAAATCGGCATTGTAAGGAGTAGTGAC 359487
Query 303687 CGCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCAT 303746
| | ||| || ||||| || | || ||| ||||| ||||||||||||||||
Sbjct 359488 AGACAAGTTGATACGGAAGGTGG-AGTATGG--CATGACACGAACTTTATGACACATCAT 359544
Query 303747 AGACATTCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACC 303794
||||| | || || | |||||||||||||| | ||||| |||||
Sbjct 359545 GGACATCTTATGAAGGGAAGGCTGACGATTGAACAAGACGGGATCACC 359592
Score = 86.0 bits (94), Expect = 2e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 302562 AATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGT 302621
|| |||||| || |||| ||| | |||||||| ||||| |||||||| | ||
Sbjct 358363 AACCATAATATCCTCCAATGCCTTCAACAAACGACGTTGAATGTAACCAGTCTCTGCAGT 358422
Query 302622 TTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTC 302681
||| || || || ||||| | ||| |||||||| |||| ||||||||||| | || |
Sbjct 358423 TTTCACTGCAGTGTCAATCAAACCTTCACGACCAGCCATGGCATGGAAGAACAATTCCTG 358482
Query 302682 CGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTC 302741
||| || || | | | ||| | ||||||||||| | ||| | |||| ||
Sbjct 358483 GGGTGTAAGACCTCTCAAGTACGAGTTTTCAACGAAACCTTTAGACTCAGCAGAATAATC 358542
Query 302742 GAACTTGGTAAAGTGTGGCA 302761
|||||| ||||||||||
Sbjct 358543 ATCCTTGGTGAAGTGTGGCA 358562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816166817612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |