Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq12 95.1 1e-13
>seq12
Length=1129233
Score = 95.1 bits (104), Expect = 1e-13
Identities = 172/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||| | || |||| ||| || || || | ||| || | | || || ||
Sbjct 52552 TGGTCGACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAG 52493
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184
|||||||| || || | ||| | ||| | ||| || || ||||| ||| | ||
Sbjct 52492 GTACCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATA-CC 52434
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| |||||||| | ||| || || | || |||| ||| | || ||||||||||| ||
Sbjct 52433 AATACCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTC 52374
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| || ||| ||||||| | || | |||||| || || | ||||| || | || ||
Sbjct 52373 AATAGAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACC 52314
Query 1630305 GGCGTTGAA 1630313
|| |||||
Sbjct 52313 CGCATTGAA 52305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107132963084092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |