Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-13 >seq12 Length=1129233 Score = 95.1 bits (104), Expect = 1e-13 Identities = 172/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| | || |||| ||| || || || | ||| || | | || || || Sbjct 52552 TGGTCGACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAG 52493 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184 |||||||| || || | ||| | ||| | ||| || || ||||| ||| | || Sbjct 52492 GTACCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATA-CC 52434 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || |||||||| | ||| || || | || |||| ||| | || ||||||||||| || Sbjct 52433 AATACCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTC 52374 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || ||| ||||||| | || | |||||| || || | ||||| || | || || Sbjct 52373 AATAGAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACC 52314 Query 1630305 GGCGTTGAA 1630313 || ||||| Sbjct 52313 CGCATTGAA 52305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107132963084092