Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq45 118 9e-22
seq15 86.0 5e-12
>seq45
Length=579175
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || || || || || || || ||||||||| | ||| ||| ||
Sbjct 355112 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTCT 355053
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||||| | | | | || || ||||||||| || || || || | || |||
Sbjct 355052 TCTGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGGAATCCCACCAGAT 354993
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || ||| | || | ||| ||||| || ||||||| | |||||| || | || |||
Sbjct 354992 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAACTTTGTCCGACTAC 354933
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||||||||| ||||| || |||||| |||| | ||| || |||| ||
Sbjct 354932 AACATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAGAGGTGG 354883
>seq15
Length=115448
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || ||||| ||||||||||| ||| | ||| || ||
Sbjct 245 ATGCAGATTTTCGTCAAGACATTAACAGGCAAAACCATCACCTTGGAAGTCGAATCTTCA 304
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | || ||||| ||||| || |||||||| | || |||||
Sbjct 305 GACACGATCGATAACGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 364
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||| | || | ||| ||||| ||| | || |||| |||||| | | || |||||
Sbjct 365 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 424
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAG 110487
|| || || || ||||| | ||| |||| || ||
Sbjct 425 ATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAG 459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841217605468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |