Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 2e-13 seq13 86.0 8e-12 >seq16 Length=109755 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 168650 AGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATAT 168709 ||| | |||||| ||||| || || ||||| |||||||||||| || ||| | ||| | Sbjct 14742 AGAGGATGATTTGGGTCCTATCTACGGATTCCAATGGAGACATTTCGGTGCTAAGTATGT 14801 Query 168710 TGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAAATAC 168769 || |||||||| || || |||||||||||| | || ||| | | | ||| |||| Sbjct 14802 CGATTGTGATACCGACTATACCGGACAAGGATTTGATCAAATCGCTACCATTATTCATAC 14861 Query 168770 TTTACACAACAATCCGGAAAATAGAAGAAT 168799 | || | | |||||| | |||||||||| Sbjct 14862 TCTAAAGACCAATCCTTACGATAGAAGAAT 14891 >seq13 Length=158396 Score = 86.0 bits (94), Expect = 8e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 193482 CAAAAAGGAACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGT 193541 || || || ||| |||||||| ||| ||| ||||||||||| || || ||| |||| Sbjct 18535 CAGAAGGGTACTATTGGTATGACGTATAGACATGAAGATATGCCGTTCACTGCTGAAGGT 18476 Query 193542 ATGGTACCAGATATTATTATTAATCCAAATTGTATTCCATCCAGAATGAC 193591 || || || ||||| |||| |||||| |||||||||| ||| | ||||| Sbjct 18475 ATTGTTCCTGATATCGTTATCAATCCACATTGTATTCCTTCCCGTATGAC 18426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635176996581280