Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq45 181 2e-40
seq1 147 4e-30
>seq45
Length=579175
Score = 181 bits (200), Expect = 2e-40
Identities = 186/239 (78%), Gaps = 3/239 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | ||||| ||||||| || ||||| || || || || || || |
Sbjct 354881 TACCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGG 354940
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | |||| ||||| || | ||| || ||||||||||| | ||| || |||||||| |
Sbjct 354941 ACAAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTG 355000
Query 82702 GTATTCCTTCCTTATCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760
| ||||| ||||||||||||||||| ||| || ||||| ||||| |||||| || ||
Sbjct 355001 GGATTCCCTCCTTATCTTGAATCTTCTGC-TTGACATTGTCAATGGTATCAGAAGACTCG 355059
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATT 82819
|||||||| || || ||||| || ||||| ||||| || || || |||||| || ||||
Sbjct 355060 ACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT-TTCTATT 355117
>seq1
Length=1746572
Score = 147 bits (162), Expect = 4e-30
Identities = 180/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || |||||||||| || ||||| ||||| || || || || ||
Sbjct 813831 ACCACCTCTCAATCTCAAGACTAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGA 813890
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| |||| || || || | || || ||||||||||| | ||| || ||||| || ||
Sbjct 813891 CAATGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGG 813950
Query 82703 TATTCCTTCCTTATCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
||||| ||||| ||||| ||||| ||| || ||||| ||||| || ||| || || |
Sbjct 813951 AATTCCCTCCTTGTCTTGGATCTTCTGC-TTGACATTGTCAATAGTGTCAGAAGACTCAA 814009
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTT 82821
| ||||| || || ||||| || ||||| ||||| || || || ||||| | ||| ||
Sbjct 814010 CCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAAATTTGCATATTGATAAGTT 814069
Query 82822 TCT 82824
|||
Sbjct 814070 TCT 814072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826243945764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |