Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq15 105 4e-18 seq45 91.5 1e-13 >seq15 Length=115448 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || ||||| ||| || || || ||||| || || Sbjct 244 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGA 185 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| | | || || || || || |||||||| ||||| | ||||||||| | || Sbjct 184 AAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGG 125 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || || || |||||| |||| || | || || || || | Sbjct 124 AATACCTTCTTTATCTTGGATCTTTTGTTTC-ACATTATCGATCGTATCAGAAGACTCGA 66 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || || || || || || ||||||||| Sbjct 65 CTTCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTGCATA 16 >seq45 Length=579175 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | | ||||| || | || || ||||| |||||||| ||||| Sbjct 354882 ACCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGA 354941 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||||||| || || ||||| ||||| | |||||||||| | || Sbjct 354942 CAAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGG 355001 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || || || ||| ||||| || |||| ||| | ||| || || || | Sbjct 355002 GATTCCCTCCTTATCTTGAATCTTCTGCTT-GACATTGTCAATGGTATCAGAAGACTCGA 355060 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || ||||| || || || || || || || ||||| Sbjct 355061 CTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 355109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703695537920