Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq15 105 4e-18
seq45 91.5 1e-13
>seq15
Length=115448
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || ||||| ||| || || || ||||| || ||
Sbjct 244 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGA 185
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||||| | | || || || || || |||||||| ||||| | ||||||||| | ||
Sbjct 184 AAGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGG 125
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || || || |||||| |||| || | || || || || |
Sbjct 124 AATACCTTCTTTATCTTGGATCTTTTGTTTC-ACATTATCGATCGTATCAGAAGACTCGA 66
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || || || || || |||||||||
Sbjct 65 CTTCCAAGGTGATGGTCTTACCAGTCAATGTCTTGACGAAAATCTGCATA 16
>seq45
Length=579175
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | | ||||| || | || || ||||| |||||||| |||||
Sbjct 354882 ACCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGA 354941
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | |||||||||| | ||
Sbjct 354942 CAAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGG 355001
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || ||| ||||| || |||| ||| | ||| || || || |
Sbjct 355002 GATTCCCTCCTTATCTTGAATCTTCTGCTT-GACATTGTCAATGGTATCAGAAGACTCGA 355060
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || || ||||| || || || || || || || |||||
Sbjct 355061 CTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 355109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703695537920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |