Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq15 140 8e-28
seq1 98.7 2e-15
seq45 86.0 1e-11
>seq15
Length=115448
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | ||||| ||||| ||||| |||||||| ||| ||| |||
Sbjct 248 CAGATTTTCGTCAAGACATTAACAGGCAAAACCATCACCTTGGAAGTCGAATCTTCAGAC 307
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || || |||||||| ||||| |||||||| ||| || || ||
Sbjct 308 ACGATCGATAACGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAGCAG 367
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| ||||| |||||||| |||||||| || || | | || ||||| ||
Sbjct 368 AGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAATATC 427
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384
||||| ||||||||||||||| | || |||||
Sbjct 428 CAGAAGGAGTCTACTCTTCACTTGGTCTTGAG 459
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || || ||||| |||||||| || ||||||
Sbjct 20 CAGATTTTCGTCAAGACATTGACTGGTAAGACCATCACCTTGGAAGTCGAGTCTTCTGAT 79
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || || |||||||| ||||| |||||||| ||| || || ||
Sbjct 80 ACGATCGATAATGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAGCAG 139
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| ||||| |||||||| |||||||| || || | | || ||||| ||
Sbjct 140 AGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAATATC 199
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| ||||||||||||||| | |||||||||
Sbjct 200 CAGAAGGAGTCTACTCTTCACTTGGTTTTGAGA 232
Score = 89.7 bits (98), Expect = 1e-12
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
||||||||| | ||||||||||||||| ||||||| ||| ||||||| | || || ||
Sbjct 232 TCTCAAAACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACC 173
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGAT 204843
|||||| | |||||| ||||| |||||
Sbjct 172 ATCTTCTAACTGCTTACCGGCAAAGAT 146
Score = 84.2 bits (92), Expect = 5e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 204758 CTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCA 204817
||||| || | ||||||||||||||| ||||||| ||| ||||||| | || || |||
Sbjct 459 CTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACCA 400
Query 204818 TCTTCCAGCTGCTTTCCGGCGAAGAT 204843
||||| | |||||| ||||| |||||
Sbjct 399 TCTTCTAACTGCTTACCGGCAAAGAT 374
>seq1
Length=1746572
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || ||||| || || ||||||||| | || || |||||
Sbjct 814034 ACCGGTAAGACCATTACCTTGGAGGTTGAGTCTTCTGACACTATTGACAATGTCAAGCAG 813975
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || || |||||| || || || ||| | ||||| || || |||
Sbjct 813974 AAGATCCAAGACAAGGAGGGAATTCCACCTGATCAGCAGAGATTGATCTTTGCTGGTAAG 813915
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||| ||||| || || ||| | || |||||| ||||||| || || || | |||
Sbjct 813914 CAGTTGGAGGATGGCAGAACATTGTCAGACTACAACATCCAGAAGGAATCCACCTTGCAC 813855
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 813854 TTAGTCTTGAGA 813843
>seq45
Length=579175
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || |||||||| || |||||| || | || || |||||
Sbjct 355085 ACGGGTAAGACCATTACCTTGGAAGTCGAGTCTTCTGATACCATTGACAATGTCAAGCAG 355026
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || || ||||| || || || ||| | ||||| || || |||
Sbjct 355025 AAGATTCAAGATAAGGAGGGAATCCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAG 354966
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||| || || || |||||| |||| |||||| | || || || || || | |||
Sbjct 354965 CAATTGGAGGACGGCAGAACTTTGTCCGACTACAACATTCAAAAGGAATCAACATTGCAC 354906
Query 206374 CTTGTTTTGAGA 206385
| ||| | |||
Sbjct 354905 TTGGTTCTCAGA 354894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819649201996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |