Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq15 104 2e-17 seq45 86.0 6e-12 >seq15 Length=115448 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || ||||| || || || | ||||| | |||||||| | Sbjct 17 ATGCAGATTTTCGTCAAGACATTGACTGGTAAGACCATCACCTTGGAAGTCGAGTCTTCT 76 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || |||||||| || |||||||| ||||| || || |||||| Sbjct 77 GATACGATCGATAATGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 136 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | | ||| || || | ||||||| ||||| | || |||||| Sbjct 137 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 196 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || || || |||| || || || ||||||||||| || Sbjct 197 ATCCAGAAGGAGTCTACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 243 >seq45 Length=579175 Score = 86.0 bits (94), Expect = 6e-12 Identities = 165/243 (68%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 25159 TTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGAT 25218 |||||||| | || |||||| | || || || || || || || || | || || | Sbjct 355122 TTTTCAAT---AGAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTT 355066 Query 25219 CGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGG 25278 |||||||| | ||||| || || | || || || || ||| ||||| ||||| Sbjct 355065 GGAAGTCGAGTCTTCTGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGG 355006 Query 25279 TATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 25338 || || || |||||||| ||| | || | | || || ||| | || || | |||| Sbjct 355005 AATCCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAAC 354946 Query 25339 TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGG 25398 | | ||| ||||| |||||||| ||||| || | || || || | ||||||||||| Sbjct 354945 TTTGTCCGACTACAACATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAGAGG 354886 Query 25399 AGG 25401 || Sbjct 354885 TGG 354883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093977160320