Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq15 104 2e-17
seq45 86.0 6e-12
>seq15
Length=115448
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || ||||| || || || | ||||| | |||||||| |
Sbjct 17 ATGCAGATTTTCGTCAAGACATTGACTGGTAAGACCATCACCTTGGAAGTCGAGTCTTCT 76
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || |||||||| || |||||||| ||||| || || ||||||
Sbjct 77 GATACGATCGATAATGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 136
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||| | || | | ||| || || | ||||||| ||||| | || ||||||
Sbjct 137 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTTCTGACTACAAT 196
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| || || || || || |||| || || || ||||||||||| ||
Sbjct 197 ATCCAGAAGGAGTCTACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 243
>seq45
Length=579175
Score = 86.0 bits (94), Expect = 6e-12
Identities = 165/243 (68%), Gaps = 3/243 (1%)
Strand=Plus/Minus
Query 25159 TTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGAT 25218
|||||||| | || |||||| | || || || || || || || || | || || |
Sbjct 355122 TTTTCAAT---AGAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTT 355066
Query 25219 CGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGG 25278
|||||||| | ||||| || || | || || || || ||| ||||| |||||
Sbjct 355065 GGAAGTCGAGTCTTCTGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGG 355006
Query 25279 TATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 25338
|| || || |||||||| ||| | || | | || || ||| | || || | ||||
Sbjct 355005 AATCCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAAC 354946
Query 25339 TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGG 25398
| | ||| ||||| |||||||| ||||| || | || || || | |||||||||||
Sbjct 354945 TTTGTCCGACTACAACATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAGAGG 354886
Query 25399 AGG 25401
||
Sbjct 354885 TGG 354883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093977160320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |