Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 111 2e-18 >seq12 Length=1129233 Score = 111 bits (122), Expect = 2e-18 Identities = 176/252 (70%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 259934 TTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCC 259993 || ||||| || || || | ||||||| || || |||||| || | | ||||||| | Sbjct 52305 TTCAATGCGGGTACCCCACATCCGCAGATGTCTTCCTGCTTTTTGGTTGCGATGAAGGAC 52364 Query 259994 GATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCC 260053 ||||| || || |||||||| || || | || |||| || | || || ||| | ||| Sbjct 52365 GATTCTATTGAAGGCATCTACGATACTTTGAAAGAGTGTGCCTTGATTTCGAAGACCGCC 52424 Query 260054 GGCGGCATCGGTTTTGCCGCA----CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGG 260109 ||||| || ||| | ||| ||||| || || ||| | ||| | ||| | || || Sbjct 52425 GGCGGTATTGGTAT----GCATATTCACAACGTTCGTGCCACTGGCTCTTACATCGCCGG 52480 Query 260110 CACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCG 260169 |||||||| || || || || | || ||| |||| ||||| ||| |||| || | Sbjct 52481 TACCAACGGTACCTCAAATGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCAG 52540 Query 260170 CTACGTCGACCA 260181 ||||||||||| Sbjct 52541 ATACGTCGACCA 52552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177803869660312