Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 145 8e-30 seq45 134 1e-26 >seq1 Length=1746572 Score = 145 bits (160), Expect = 8e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | ||||||||||| || ||||||||||| | | Sbjct 813832 CCACCTCTCAATCTCAAGACTAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 813891 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || | ||| || || ||||| ||||| | ||||||||| || || Sbjct 813892 AATGTTCTGCCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGG 813950 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || ||||| || || || ||||| ||| | ||||| || || || || Sbjct 813951 AATTCCCTCCTTGTCTTGGATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGACTCAAC 814010 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | |||||||| |||||||| || || ||||||||||||||||| ||| Sbjct 814011 CTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAAATTTGCATATTG 814062 >seq45 Length=579175 Score = 134 bits (148), Expect = 1e-26 Identities = 152/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || |||||||||||||||||||||||| ||| | | || ||| || | || || || Sbjct 354913 GTTGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTGCC-GTCCTCCAATTGCTTACC 354971 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||| ||||| | ||||||||| || || || || || || |||||||| || || || Sbjct 354972 AGCAAAGATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTATCTTGAATCTTCTGCTT 355031 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | || || || || || || || | |||||||| ||||| || || || Sbjct 355032 GACATTGTCAATGGTATCAGAAGACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGT 355091 Query 134696 TTTAACGAAAATTTGCATTTT 134716 |||||||||||||||||||| Sbjct 355092 CTTAACGAAAATTTGCATTTT 355112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397919871520